Difference between revisions of "Tiso gene 20417"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AGMATIN-RXN AGMATIN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
(Created page with "Category:Gene == Gene Tiso_gene_20417 == * right end position: ** 1315 * transcription direction: ** POSITIVE * left end position: ** 27 * centisome position: ** 1.9607844...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AGMATIN-RXN AGMATIN-RXN] ==
+
== Gene Tiso_gene_20417 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 1315
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/3.5.3.11 EC-3.5.3.11]
+
** POSITIVE
 +
* left end position:
 +
** 27
 +
* centisome position:
 +
** 1.9607844   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[CARBONYL-REDUCTASE-NADPH-RXN]]
−
** 1 [[AGMATHINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[UREA]][c] '''+''' 1 [[PUTRESCINE]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 agmatine[c] '''+''' 1 H2O[c] '''=>''' 1 urea[c] '''+''' 1 putrescine[c]
+
* Reaction: [[MANNURONATE-REDUCTASE-RXN]]
−
 
+
** Source: [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
*** Assignment: ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
** Source: [[annotation-experimental_annotation]]
−
* [[Tiso_gene_4415]]
+
*** Assignment: ec-number
−
** [[pantograph]]-[[esiliculosus]]
+
== Pathways associated ==
−
== Pathways  ==
+
−
* [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY0-823]], L-arginine degradation III (arginine decarboxylase/agmatinase pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-823 PWY0-823]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-40]], putrescine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-40 PWY-40]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=1315}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13929 13929]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=27}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01157 R01157]
+
{{#set: centisome position=1.9607844    }}
−
* UNIPROT:
+
{{#set: reaction associated=CARBONYL-REDUCTASE-NADPH-RXN|MANNURONATE-REDUCTASE-RXN}}
−
** [http://www.uniprot.org/uniprot/P60654 P60654]
+
−
** [http://www.uniprot.org/uniprot/P60653 P60653]
+
−
** [http://www.uniprot.org/uniprot/P60651 P60651]
+
−
** [http://www.uniprot.org/uniprot/Q57757 Q57757]
+
−
** [http://www.uniprot.org/uniprot/P73270 P73270]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: ec number=EC-3.5.3.11}}
+
−
{{#set: gene associated=Tiso_gene_4415}}
+
−
{{#set: in pathway=PWY-6305|PWY0-823|PWY-40}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 21:18, 21 March 2018

Gene Tiso_gene_20417

  • right end position:
    • 1315
  • transcription direction:
    • POSITIVE
  • left end position:
    • 27
  • centisome position:
    • 1.9607844
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_20417&oldid=47587"