Difference between revisions of "TransportSeed CO+2"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11667 RXN-11667] == * direction: ** REVERSIBLE * common name: ** (S)-3-hydroxybutanoyl-CoA dehy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TransportSeed_CO+2 TransportSeed_CO+2] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11667 RXN-11667] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TransportSeed_CO+2 TransportSeed_CO+2] ==
 
* direction:
 
* direction:
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** REVERSIBLE
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** LEFT-TO-RIGHT
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* common name:
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** (S)-3-hydroxybutanoyl-CoA dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1.150 EC-4.2.1.150]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
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** 1 [[S-3-HYDROXYBUTANOYL-COA]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[CROTONYL-COA]][c]
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** 1.0 [[CO+2]][e] '''=>''' 1.0 [[CO+2]][c]
 
* With common name(s):
 
* With common name(s):
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** 1 (S)-3-hydroxybutanoyl-CoA[c] '''<=>''' 1 H2O[c] '''+''' 1 crotonyl-CoA[c]
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** 1.0 Co2+[e] '''=>''' 1.0 Co2+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
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* [[Tiso_gene_5857]]
 
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** [[pantograph]]-[[athaliana]]
 
 
== Pathways  ==
 
== Pathways  ==
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* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate): [http://metacyc.org/META/NEW-IMAGE?object=P162-PWY P162-PWY]
 
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** '''4''' reactions found over '''11''' reactions in the full pathway
 
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* [[CENTFERM-PWY]], pyruvate fermentation to butanoate: [http://metacyc.org/META/NEW-IMAGE?object=CENTFERM-PWY CENTFERM-PWY]
 
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** '''3''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-5177]], glutaryl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5177 PWY-5177]
 
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** '''3''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-6583]], pyruvate fermentation to butanol I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6583 PWY-6583]
 
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** '''4''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-6883]], pyruvate fermentation to butanol II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6883 PWY-6883]
 
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** '''4''' reactions found over '''6''' reactions in the full pathway
 
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* [[P3-PWY]], gallate degradation III (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P3-PWY P3-PWY]
 
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** '''1''' reactions found over '''11''' reactions in the full pathway
 
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* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7401 PWY-7401]
 
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** '''5''' reactions found over '''17''' reactions in the full pathway
 
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* [[PWY-6863]], pyruvate fermentation to hexanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863]
 
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** '''5''' reactions found over '''11''' reactions in the full pathway
 
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* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
 
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** '''8''' reactions found over '''16''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* Category: [[orthology]]
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* Category: [[manual]]
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** Source: [[orthology-athaliana]]
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** Source: [[manual-import_from_medium]]
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*** Tool: [[pantograph]]
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*** Comment: [[added to manage seeds from extracellular to cytosol compartment]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26558 26558]
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{{#set: in pathway=}}
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* LIGAND-RXN:
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{{#set: reconstruction category=manual}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03026 R03026]
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{{#set: reconstruction source=manual-import_from_medium}}
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{{#set: direction=REVERSIBLE}}
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{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
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{{#set: common name=(S)-3-hydroxybutanoyl-CoA dehydrogenase}}
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{{#set: ec number=EC-4.2.1.150}}
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{{#set: gene associated=Tiso_gene_5857}}
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{{#set: in pathway=P162-PWY|CENTFERM-PWY|PWY-5177|PWY-6583|PWY-6883|P3-PWY|PWY-7401|PWY-6863|PWY-5789}}
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−
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana}}
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−
{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:19, 21 March 2018

Reaction TransportSeed_CO+2

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Co2+[e] => 1.0 Co2+[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TransportSeed_CO%2B2&oldid=47786"