Difference between revisions of "RXN-15130"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PFRUCTPHOS-RXN 6PFRUCTPHOS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** pyrophosphate-d...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15130 RXN-15130] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PFRUCTPHOS-RXN 6PFRUCTPHOS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15130 RXN-15130] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** pyrophosphate-dependent_phosphofructose_kinase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.11 EC-2.7.1.11]
+
** [http://enzyme.expasy.org/EC/4.4.1.1 EC-4.4.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[FRUCTOSE-6P]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[FRUCTOSE-16-DIPHOSPHATE]][c]
+
** 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[CYS]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 β-D-fructofuranose 6-phosphate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 fructose 1,6-bisphosphate[c]
+
** 1 L-cystathionine[c] '''+''' 1 H2O[c] '''=>''' 1 2-oxobutanoate[c] '''+''' 1 ammonium[c] '''+''' 1 L-cysteine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5733]]
+
* Gene: [[Tiso_gene_3732]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_596]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-1042]], glycolysis IV (plant cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS]
 
−
** '''12''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385]
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-1861]], formaldehyde assimilation II (RuMP Cycle): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484]
 
−
** '''11''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-creinhardtii]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16109 16109]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00756 R00756]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01001 R01001]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q7M3F7 Q7M3F7]
+
** [http://www.uniprot.org/uniprot/P21357 P21357]
−
** [http://www.uniprot.org/uniprot/Q7M4J2 Q7M4J2]
+
** [http://www.uniprot.org/uniprot/P18757 P18757]
−
** [http://www.uniprot.org/uniprot/P12382 P12382]
+
** [http://www.uniprot.org/uniprot/P32929 P32929]
−
** [http://www.uniprot.org/uniprot/Q27665 Q27665]
+
** [http://www.uniprot.org/uniprot/P31373 P31373]
−
** [http://www.uniprot.org/uniprot/P52034 P52034]
+
** [http://www.uniprot.org/uniprot/Q47847 Q47847]
−
** [http://www.uniprot.org/uniprot/Q7M4K9 Q7M4K9]
+
−
** [http://www.uniprot.org/uniprot/P43863 P43863]
+
−
** [http://www.uniprot.org/uniprot/P20275 P20275]
+
−
** [http://www.uniprot.org/uniprot/P47457 P47457]
+
−
** [http://www.uniprot.org/uniprot/Q01813 Q01813]
+
−
** [http://www.uniprot.org/uniprot/Q07636 Q07636]
+
−
** [http://www.uniprot.org/uniprot/P16861 P16861]
+
−
** [http://www.uniprot.org/uniprot/P16862 P16862]
+
−
** [http://www.uniprot.org/uniprot/P00512 P00512]
+
−
** [http://www.uniprot.org/uniprot/P0A796 P0A796]
+
−
** [http://www.uniprot.org/uniprot/P06999 P06999]
+
−
** [http://www.uniprot.org/uniprot/P08237 P08237]
+
−
** [http://www.uniprot.org/uniprot/P00511 P00511]
+
−
** [http://www.uniprot.org/uniprot/P70927 P70927]
+
−
** [http://www.uniprot.org/uniprot/Q7M3F5 Q7M3F5]
+
−
** [http://www.uniprot.org/uniprot/Q9TWY0 Q9TWY0]
+
−
** [http://www.uniprot.org/uniprot/P30835 P30835]
+
−
** [http://www.uniprot.org/uniprot/Q03215 Q03215]
+
−
** [http://www.uniprot.org/uniprot/Q03216 Q03216]
+
−
** [http://www.uniprot.org/uniprot/P80019 P80019]
+
−
** [http://www.uniprot.org/uniprot/Q59214 Q59214]
+
−
** [http://www.uniprot.org/uniprot/Q27705 Q27705]
+
−
** [http://www.uniprot.org/uniprot/P75476 P75476]
+
−
** [http://www.uniprot.org/uniprot/P72830 P72830]
+
−
** [http://www.uniprot.org/uniprot/Q55988 Q55988]
+
−
** [http://www.uniprot.org/uniprot/Q49084 Q49084]
+
−
** [http://www.uniprot.org/uniprot/O08333 O08333]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=pyrophosphate-dependent_phosphofructose_kinase}}
+
{{#set: ec number=EC-4.4.1.1}}
−
{{#set: ec number=EC-2.7.1.11}}
+
{{#set: gene associated=Tiso_gene_3732}}
−
{{#set: gene associated=Tiso_gene_5733|Tiso_gene_596}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=PWY-1042|GLYCOLYSIS|PWY-7385|PWY-1861|ANAGLYCOLYSIS-PWY|PWY-5484}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
{{#set: reconstruction source=orthology-esiliculosus}}
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|manual-primary_network|orthology-creinhardtii}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:19, 21 March 2018

Reaction RXN-15130

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-15130&oldid=47809"