Difference between revisions of "PSII-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATDGD ATDGD] == * direction: ** LEFT-TO-RIGHT * common name: ** ATP:dGDP phosphotransferase * Synon...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSII-RXN PSII-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Photosystem II D2 protein * e...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSII-RXN PSII-RXN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Photosystem II D2 protein |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/1.10.3.9 EC-1.10.3.9] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** | + | ** 2 [[PLASTOQUINONE]][c] '''+''' 2 [[WATER]][c] '''+''' 4 [[PROTON]][e] '''+''' 1 [[Light]][c] '''=>''' 2 [[Plastoquinols]][c] '''+''' 4 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** | + | ** 2 a plastoquinone[c] '''+''' 2 H2O[c] '''+''' 4 H+[e] '''+''' 1 hν[c] '''=>''' 2 a plastoquinol[c] '''+''' 4 H+[c] '''+''' 1 oxygen[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[Tiso_gene_5033]] |
| − | ** [[ | + | ** Source: [[annotation-experimental_annotation]] |
| − | * [[ | + | *** Assignment: EC-NUMBER |
| − | ** [[ | + | * Gene: [[Tiso_gene_13951]] |
| + | ** Source: [[orthology-esiliculosus]] | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY-101]], photosynthesis light reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-101 PWY-101] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| − | ** Source: [[orthology- | + | ** Source: [[orthology-esiliculosus]] |
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30250 30250] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=Photosystem II D2 protein}} |
| − | {{#set: gene associated= | + | {{#set: ec number=EC-1.10.3.9}} |
| − | {{#set: in pathway=}} | + | {{#set: gene associated=Tiso_gene_5033|Tiso_gene_13951}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: in pathway=PWY-101}} |
| − | {{#set: reconstruction source=orthology- | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus}} |
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 21:19, 21 March 2018
Contents
Reaction PSII-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- Photosystem II D2 protein
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 2 PLASTOQUINONE[c] + 2 WATER[c] + 4 PROTON[e] + 1 Light[c] => 2 Plastoquinols[c] + 4 PROTON[c] + 1 OXYGEN-MOLECULE[c]
- With common name(s):
- 2 a plastoquinone[c] + 2 H2O[c] + 4 H+[e] + 1 hν[c] => 2 a plastoquinol[c] + 4 H+[c] + 1 oxygen[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_5033
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Gene: Tiso_gene_13951
- Source: orthology-esiliculosus
Pathways
- PWY-101, photosynthesis light reactions: PWY-101
- 3 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links
- RHEA:
