Difference between revisions of "Tiso gene 14109"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-NITROPHENYLPHOSPHATASE-RXN 4-NITROPHENYLPHOSPHATASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
(Created page with "Category:Gene == Gene Tiso_gene_14109 == * right end position: ** 5747 * transcription direction: ** POSITIVE * left end position: ** 3181 * centisome position: ** 54.4785...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-NITROPHENYLPHOSPHATASE-RXN 4-NITROPHENYLPHOSPHATASE-RXN] ==
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== Gene Tiso_gene_14109 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 5747
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* common name:
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* transcription direction:
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** phosphoglycolate_phosphatase_2
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** POSITIVE
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** ORF
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* left end position:
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* ec number:
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** 3181
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** [http://enzyme.expasy.org/EC/3.1.3.41 EC-3.1.3.41]
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* centisome position:
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** 54.478508   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-12086]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-194]][c] '''=>''' 1 [[P-NITROPHENOL]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 4-nitrophenyl phosphate[c] '''=>''' 1 4-nitrophenol[c] '''+''' 1 phosphate[c] '''+''' 1 H+[c]
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* Reaction: [[RXN-12579]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[TRIACYLGLYCEROL-LIPASE-RXN]]
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* [[Tiso_gene_6980]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_18651]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15176]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15498]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18054]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15559]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6236]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5996]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6690]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_442]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[LIPAS-PWY]]
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* [[PWY-6857]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=5747}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21664 21664]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=3181}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03024 R03024]
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{{#set: centisome position=54.478508    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
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{{#set: common name=phosphoglycolate_phosphatase_2}}
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{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.1.3.41}}
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{{#set: gene associated=Tiso_gene_6980|Tiso_gene_18651|Tiso_gene_15176|Tiso_gene_15498|Tiso_gene_18054|Tiso_gene_15559|Tiso_gene_6236|Tiso_gene_5996|Tiso_gene_6690|Tiso_gene_442}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:19, 21 March 2018

Gene Tiso_gene_14109

  • right end position:
    • 5747
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3181
  • centisome position:
    • 54.478508
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14109&oldid=47840"