Difference between revisions of "RXN-10604"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PPGPPSYN-RXN PPGPPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ca2+-activated_spot-l...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10604 RXN-10604] == * direction: ** LEFT-TO-RIGHT * common name: ** type_i_iodothyronine_deiodi...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PPGPPSYN-RXN PPGPPSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10604 RXN-10604] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ca2+-activated_spot-like_protein
+
** type_i_iodothyronine_deiodinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.7.2 EC-3.1.7.2]
+
** [http://enzyme.expasy.org/EC/1.21.99.4 EC-1.21.99.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[GUANOSINE-5DP-3DP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[CPD-10813]][c] '''+''' 1 [[Donor-H2]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-387]][c] '''+''' 1 [[Acceptor]][c] '''+''' 1 [[CPD-11395]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 ppGpp[c] '''=>''' 1 H+[c] '''+''' 1 GDP[c] '''+''' 1 diphosphate[c]
+
** 1 3,3',5'-triiodo-L-thyronine[c] '''+''' 1 a reduced electron acceptor[c] '''=>''' 1 H+[c] '''+''' 1 iodide[c] '''+''' 1 an oxidized electron acceptor[c] '''+''' 1 3,3'-diiodothyronine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_6799]]
+
* Gene: [[Tiso_gene_20481]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PPGPPMET-PWY]], ppGpp biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY]
+
* [[PWY-6260]], thyroid hormone metabolism I (via deiodination): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6260 PWY-6260]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''12''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14253 14253]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00336 R00336]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9PN26 Q9PN26]
 
−
** [http://www.uniprot.org/uniprot/Q9JT97 Q9JT97]
 
−
** [http://www.uniprot.org/uniprot/P43811 P43811]
 
−
** [http://www.uniprot.org/uniprot/P0AG24 P0AG24]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ca2+-activated_spot-like_protein}}
+
{{#set: common name=type_i_iodothyronine_deiodinase}}
−
{{#set: ec number=EC-3.1.7.2}}
+
{{#set: ec number=EC-1.21.99.4}}
−
{{#set: gene associated=Tiso_gene_6799}}
+
{{#set: gene associated=Tiso_gene_20481}}
−
{{#set: in pathway=PPGPPMET-PWY}}
+
{{#set: in pathway=PWY-6260}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:20, 21 March 2018

Reaction RXN-10604

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • type_i_iodothyronine_deiodinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3,3',5'-triiodo-L-thyronine[c] + 1 a reduced electron acceptor[c] => 1 H+[c] + 1 iodide[c] + 1 an oxidized electron acceptor[c] + 1 3,3'-diiodothyronine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6260, thyroid hormone metabolism I (via deiodination): PWY-6260
    • 3 reactions found over 12 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10604&oldid=47884"