Difference between revisions of "RXN-10855"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_20164 == * left end position: ** 534 * transcription direction: ** POSITIVE * right end position: ** 1630 * centisome position: ** 31.43025...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10855 RXN-10855] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** ORF...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10855 RXN-10855] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** polyketide_synthase |
| − | * | + | ** ORF |
| − | ** | + | |
| − | * | + | |
| − | * | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** in-silico_annotation | + | ** 1 [[CPD-7682]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-468]][c] |
| − | *** | + | * With common name(s): |
| − | * [[ | + | ** 1 (S)-2,3,4,5-tetrahydropiperidine-2-carboxylate[c] '''+''' 1 NAD(P)+[c] '''+''' 2 H2O[c] '''=>''' 1 NAD(P)H[c] '''+''' 1 H+[c] '''+''' 1 L-2-aminoadipate[c] |
| − | ** in-silico_annotation | + | |
| − | *** | + | == Genes associated with this reaction == |
| − | == Pathways | + | Genes have been associated with this reaction based on different elements listed below. |
| − | * [[ | + | * Gene: [[Tiso_gene_6563]] |
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_6562]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_5425]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_5424]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_16719]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[PWY66-425]], L-lysine degradation II (L-pipecolate pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-425 PWY66-425] | ||
| + | ** '''3''' reactions found over '''8''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=polyketide_synthase}} |
| − | {{#set: | + | {{#set: common name=ORF}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_6563|Tiso_gene_6562|Tiso_gene_5425|Tiso_gene_5424|Tiso_gene_16719}} |
| − | {{#set: | + | {{#set: in pathway=PWY66-425}} |
| − | {{#set: | + | {{#set: reconstruction category=annotation}} |
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 20:20, 21 March 2018
Contents
Reaction RXN-10855
- direction:
- LEFT-TO-RIGHT
- common name:
- polyketide_synthase
- ORF
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-7682[c] + 1 NAD-P-OR-NOP[c] + 2 WATER[c] => 1 NADH-P-OR-NOP[c] + 1 PROTON[c] + 1 CPD-468[c]
- With common name(s):
- 1 (S)-2,3,4,5-tetrahydropiperidine-2-carboxylate[c] + 1 NAD(P)+[c] + 2 H2O[c] => 1 NAD(P)H[c] + 1 H+[c] + 1 L-2-aminoadipate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_6563
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_6562
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_5425
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_5424
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_16719
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PWY66-425, L-lysine degradation II (L-pipecolate pathway): PWY66-425
- 3 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
