Difference between revisions of "HOMOGENTISATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10698 RXN-10698] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxyacyl-coenzyme_a_dehy...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HOMOGENTISATE HOMOGENTISATE] == * smiles: ** C1(C(=CC(=C(C=1)O)CC([O-])=O)O) * common name: **...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10698 RXN-10698] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HOMOGENTISATE HOMOGENTISATE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C1(C(=CC(=C(C=1)O)CC([O-])=O)O)
 
* common name:
 
* common name:
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** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
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** homogentisate
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** 3-hydroxyacyl-_dehydrogenase
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* inchi key:
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** hydroxyacyl-coenzyme_a_mitochondrial
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** InChIKey=IGMNYECMUMZDDF-UHFFFAOYSA-M
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
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** 167.141   
 
* Synonym(s):
 
* Synonym(s):
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** 2,5-dihydroxyphenylacetate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[HGDO]]
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** 1 [[CPD-11519]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CPD-11520]][c]
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* [[HOMOGENTISATE-12-DIOXYGENASE-RXN]]
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* With common name(s):
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* [[RXN-2541]]
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** 1 OPC8-3-hydroxyacyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 OPC8-3-ketoacyl-CoA[c]
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== Reaction(s) known to produce the compound ==
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* [[HPPD]]
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== Genes associated with this reaction  ==
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* [[4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) of unknown directionality ==
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* [[Tiso_gene_5857]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14027]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_18839]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14262]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18838]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14026]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
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** '''15''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460389 5460389]
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{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
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* HMDB : HMDB00130
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{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
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* LIGAND-CPD:
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{{#set: ec number=EC-1.1.1.35}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00544 C00544]
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{{#set: gene associated=Tiso_gene_5857|Tiso_gene_14027|Tiso_gene_18839|Tiso_gene_14262|Tiso_gene_18838|Tiso_gene_14026}}
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* CHEMSPIDER:
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{{#set: in pathway=PWY-735}}
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** [http://www.chemspider.com/Chemical-Structure.4573931.html 4573931]
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{{#set: reconstruction category=orthology|annotation}}
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* CHEBI:
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16169 16169]
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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* METABOLIGHTS : MTBLC16169
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{{#set: smiles=C1(C(=CC(=C(C=1)O)CC([O-])=O)O)}}
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{{#set: common name=homogentisate}}
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{{#set: inchi key=InChIKey=IGMNYECMUMZDDF-UHFFFAOYSA-M}}
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{{#set: molecular weight=167.141    }}
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{{#set: common name=2,5-dihydroxyphenylacetate}}
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{{#set: consumed by=HGDO|HOMOGENTISATE-12-DIOXYGENASE-RXN|RXN-2541}}
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{{#set: produced by=HPPD|4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN}}

Latest revision as of 20:20, 21 March 2018

Metabolite HOMOGENTISATE

  • smiles:
    • C1(C(=CC(=C(C=1)O)CC([O-])=O)O)
  • common name:
    • homogentisate
  • inchi key:
    • InChIKey=IGMNYECMUMZDDF-UHFFFAOYSA-M
  • molecular weight:
    • 167.141
  • Synonym(s):
    • 2,5-dihydroxyphenylacetate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C1(C(=CC(=C(C=1)O)CC([O-])=O)O)" cannot be used as a page name in this wiki.




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