Difference between revisions of "Tiso gene 11648"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15684 RXN-15684] == * direction: ** LEFT-TO-RIGHT * common name: ** FAD-dependent 3-benzyl-3,6...")
(Created page with "Category:Gene == Gene Tiso_gene_11648 == * right end position: ** 5026 * transcription direction: ** NEGATIVE * left end position: ** 626 * centisome position: ** 8.191573...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15684 RXN-15684] ==
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== Gene Tiso_gene_11648 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 5026
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* common name:
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* transcription direction:
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** FAD-dependent 3-benzyl-3,6 -dithio-6-(hydroxymethyl)-diketopiperazine dithiol oxidase
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** NEGATIVE
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** sulfhydryl_oxidase
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* left end position:
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** sulfhydryl_oxidase_1
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** 626
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.8.3.2 EC-1.8.3.2]
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** 8.191573   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.6.3.1-RXN]]
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** 1 [[CPD-17049]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-17050]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 3-benzyl-3,6 -dithio-6-(hydroxymethyl)-diketopiperazine[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 3-benzyl-3,6 -disulfide-6-(hydroxymethyl)-diketopiperazine[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[3.6.3.50-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_4530]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_16192]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_12454]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_20164]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_7321]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_9472]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_20163]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_12069]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_13846]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_8416]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_3314]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17069]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_13847]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-7533]], gliotoxin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7533 PWY-7533]
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** '''2''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Reaction: [[ATPASE-RXN]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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** Source: [[orthology-athaliana]]
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* Reaction: [[PE1819Z1819Zt]]
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** Source: [[orthology-creinhardtii]]
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5026}}
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{{#set: common name=FAD-dependent 3-benzyl-3,6 -dithio-6-(hydroxymethyl)-diketopiperazine dithiol oxidase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=sulfhydryl_oxidase}}
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{{#set: left end position=626}}
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{{#set: common name=sulfhydryl_oxidase_1}}
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{{#set: centisome position=8.191573    }}
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{{#set: ec number=EC-1.8.3.2}}
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{{#set: reaction associated=3.6.3.1-RXN|3.6.3.50-RXN|ATPASE-RXN|PE1819Z1819Zt}}
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{{#set: gene associated=Tiso_gene_4530|Tiso_gene_16192|Tiso_gene_12454|Tiso_gene_20164|Tiso_gene_7321|Tiso_gene_9472|Tiso_gene_20163|Tiso_gene_12069|Tiso_gene_13846|Tiso_gene_8416|Tiso_gene_3314|Tiso_gene_17069|Tiso_gene_13847}}
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{{#set: in pathway=PWY-7533}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:21, 21 March 2018

Gene Tiso_gene_11648

  • right end position:
    • 5026
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 626
  • centisome position:
    • 8.191573
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11648&oldid=48047"