Difference between revisions of "Tiso gene 5825"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-3 RXN66-3] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.2....")
(Created page with "Category:Gene == Gene Tiso_gene_5825 == * right end position: ** 5837 * transcription direction: ** POSITIVE * left end position: ** 3043 * centisome position: ** 15.87541...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-3 RXN66-3] ==
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== Gene Tiso_gene_5825 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 5837
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
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** POSITIVE
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* left end position:
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** 3043
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* centisome position:
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** 15.875417   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[ACETALD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[ACET]][c] '''+''' 2 [[PROTON]][c]
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* With common name(s):
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** 1 NAD+[c] '''+''' 1 acetaldehyde[c] '''+''' 1 H2O[c] '''=>''' 1 NADH[c] '''+''' 1 acetate[c] '''+''' 2 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_7322]]
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** [[pantograph]]-[[synechocystis]]
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== Pathways  ==
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* [[PWY-7387]], hypotaurine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7387 PWY-7387]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY66-161]], ethanol degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-161 PWY66-161]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY66-21]], ethanol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-21 PWY66-21]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY66-162]], ethanol degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-162 PWY66-162]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=5837}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25295 25295]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=3043}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00710 R00710]
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{{#set: centisome position=15.875417    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=ATPASE-RXN}}
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{{#set: ec number=EC-1.2.1.3}}
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{{#set: gene associated=Tiso_gene_7322}}
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{{#set: in pathway=PWY-7387|PWY66-161|PWY66-21|PWY66-162}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 21:21, 21 March 2018

Gene Tiso_gene_5825

  • right end position:
    • 5837
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3043
  • centisome position:
    • 15.875417
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5825&oldid=48066"