Difference between revisions of "5.3.1.23-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSII-RXN PSII-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Photosystem II D2 protein * e...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.3.1.23-RXN 5.3.1.23-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSII-RXN PSII-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.3.1.23-RXN 5.3.1.23-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Photosystem II D2 protein
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.10.3.9 EC-1.10.3.9]
+
** [http://enzyme.expasy.org/EC/5.3.1.23 EC-5.3.1.23]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Light]][c] '''+''' 2 [[PLASTOQUINONE]][c] '''+''' 2 [[WATER]][c] '''+''' 4 [[PROTON]][e] '''=>''' 4 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[Plastoquinols]][c]
+
** 1 [[CPD-444]][c] '''=>''' 1 [[CPD-1063]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 hν[c] '''+''' 2 a plastoquinone[c] '''+''' 2 H2O[c] '''+''' 4 H+[e] '''=>''' 4 H+[c] '''+''' 1 oxygen[c] '''+''' 2 a plastoquinol[c]
+
** 1 S-methyl-5-thio-α-D-ribose 1-phosphate[c] '''=>''' 1 5-methylthioribulose 1-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5033]]
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* Gene: [[Tiso_gene_3805]]
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** EXPERIMENTAL_ANNOTATION
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** Source: [[orthology-synechocystis]]
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***EC-NUMBER
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* Gene: [[Tiso_gene_18341]]
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* [[Tiso_gene_13951]]
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** Source: [[orthology-synechocystis]]
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-101]], photosynthesis light reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-101 PWY-101]
+
* [[PWY-7174]], S-methyl-5-thio-α-D-ribose 1-phosphate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7174 PWY-7174]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-4361]], S-methyl-5-thio-α-D-ribose 1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4361 PWY-4361]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[orthology-synechocystis]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30250 30250]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19989 19989]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04420 R04420]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Photosystem II D2 protein}}
+
{{#set: ec number=EC-5.3.1.23}}
−
{{#set: ec number=EC-1.10.3.9}}
+
{{#set: gene associated=Tiso_gene_3805|Tiso_gene_18341}}
−
{{#set: gene associated=Tiso_gene_5033|Tiso_gene_13951}}
+
{{#set: in pathway=PWY-7174|PWY-4361}}
−
{{#set: in pathway=PWY-101}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=orthology-synechocystis}}
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:21, 21 March 2018

Reaction 5.3.1.23-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 S-methyl-5-thio-α-D-ribose 1-phosphate[c] => 1 5-methylthioribulose 1-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7174, S-methyl-5-thio-α-D-ribose 1-phosphate degradation II: PWY-7174
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-4361, S-methyl-5-thio-α-D-ribose 1-phosphate degradation: PWY-4361
    • 1 reactions found over 7 reactions in the full pathway

Reconstruction information

External links




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