Difference between revisions of "TIGLYLCOA-HYDROXY-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_18774 == * left end position: ** 412 * transcription direction: ** NEGATIVE * right end position: ** 2211 * centisome position: ** 14.69329...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TIGLYLCOA-HYDROXY-RXN TIGLYLCOA-HYDROXY-RXN] == * direction: ** REVERSIBLE * common name: ** Tiglyl...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_18774 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TIGLYLCOA-HYDROXY-RXN TIGLYLCOA-HYDROXY-RXN] ==
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* left end position:
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* direction:
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** 412
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** REVERSIBLE
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* transcription direction:
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* common name:
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** NEGATIVE
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** Tiglyl-CoA hydratase
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* right end position:
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* ec number:
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** 2211
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
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* centisome position:
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** 14.693296   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[1.1.1.145-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[2-METHYL-3-HYDROXY-BUTYRYL-COA]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-1083]][c]
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***ec-number
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* With common name(s):
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* [[RXN-12693]]
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** 1 (2S,3S)-3-hydroxy-2-methylbutanoyl-CoA[c] '''<=>''' 1 H2O[c] '''+''' 1 (E)-2-methylcrotonoyl-CoA[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[RXN-12747]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* Gene: [[Tiso_gene_14257]]
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***ec-number
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** Source: [[orthology-esiliculosus]]
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* [[RXN-12789]]
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* Gene: [[Tiso_gene_14262]]
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** in-silico_annotation
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** Source: [[orthology-esiliculosus]]
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***ec-number
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* Gene: [[Tiso_gene_6885]]
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* [[RXN66-342]]
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** Source: [[orthology-esiliculosus]]
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** in-silico_annotation
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* Gene: [[Tiso_gene_5857]]
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***ec-number
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** Source: [[orthology-athaliana]]
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* [[RXN66-350]]
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** Source: [[orthology-esiliculosus]]
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** in-silico_annotation
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* Gene: [[Tiso_gene_16145]]
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***ec-number
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** Source: [[orthology-esiliculosus]]
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* [[RXN66-353]]
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== Pathways  ==
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** in-silico_annotation
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* [[PWY-5109]], 2-methylbutanoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109]
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***ec-number
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** '''2''' reactions found over '''6''' reactions in the full pathway
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== Pathways associated ==
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* [[ILEUDEG-PWY]], L-isoleucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY]
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* [[PWY66-378]]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7299]]
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== Reconstruction information  ==
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* [[PWY-6948]]
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* Category: [[orthology]]
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* [[PWY-6946]]
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** Source: [[orthology-athaliana]]
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* [[PWY-6944]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=412}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31119 31119]
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{{#set: right end position=2211}}
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* LIGAND-RXN:
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{{#set: centisome position=14.693296    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R04204 R04204]
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{{#set: reaction associated=1.1.1.145-RXN|RXN-12693|RXN-12747|RXN-12789|RXN66-342|RXN66-350|RXN66-353}}
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{{#set: direction=REVERSIBLE}}
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{{#set: pathway associated=PWY66-378|PWY-7299|PWY-6948|PWY-6946|PWY-6944}}
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{{#set: common name=Tiglyl-CoA hydratase}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: gene associated=Tiso_gene_14257|Tiso_gene_14262|Tiso_gene_6885|Tiso_gene_5857|Tiso_gene_16145}}
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{{#set: in pathway=PWY-5109|ILEUDEG-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:22, 21 March 2018

Reaction TIGLYLCOA-HYDROXY-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Tiglyl-CoA hydratase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5109, 2-methylbutanoate biosynthesis: PWY-5109
    • 2 reactions found over 6 reactions in the full pathway
  • ILEUDEG-PWY, L-isoleucine degradation I: ILEUDEG-PWY
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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