Difference between revisions of "Tiso gene 12839"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-474 RXN66-474] == * direction: ** LEFT-TO-RIGHT * common name: ** straight chain (R)-2-hydrox...")
(Created page with "Category:Gene == Gene Tiso_gene_12839 == * right end position: ** 1876 * transcription direction: ** POSITIVE * left end position: ** 112 * centisome position: ** 1.673640...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-474 RXN66-474] ==
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== Gene Tiso_gene_12839 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 1876
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* common name:
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* transcription direction:
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** straight chain (R)-2-hydroxy fatty acyl-CoA ligase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/6.2.1 EC-6.2.1]
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** 112
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* centisome position:
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** 1.6736401   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.2.1.23-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[R2OH-Straight-Chain-234-Sat-FA]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[R2-2OH-Straight-Chain-234-Sat-FA-CoA]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 a (2R)-2-hydroxy even numbered straight chain 2,3,4-saturated fatty acid[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 a (R)-2-hydroxy even numbered straight chain 2,3,4-saturated fatty acyl CoA[c]
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* Reaction: [[BETAGALACTOSID-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[KETOLACTOSE-RXN]]
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* [[PWY66-388]], fatty acid α-oxidation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-388 PWY66-388]
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** Source: [[annotation-in-silico_annotation]]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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*** Assignment: ec-number
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== Reconstruction information  ==
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* Reaction: [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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*** Tool: [[pathwaytools]]
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* Reaction: [[RXN-12398]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12399]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12400]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6807]]
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* [[BGALACT-PWY]]
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* [[LACTOSEUTIL-PWY]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=1876}}
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{{#set: common name=straight chain (R)-2-hydroxy fatty acyl-CoA ligase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-6.2.1}}
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{{#set: left end position=112}}
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{{#set: in pathway=PWY66-388}}
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{{#set: centisome position=1.6736401    }}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction associated=3.2.1.23-RXN|BETAGALACTOSID-RXN|KETOLACTOSE-RXN|RNA-DIRECTED-DNA-POLYMERASE-RXN|RXN-12398|RXN-12399|RXN-12400}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: pathway associated=PWY-6807|BGALACT-PWY|LACTOSEUTIL-PWY}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:22, 21 March 2018

Gene Tiso_gene_12839

  • right end position:
    • 1876
  • transcription direction:
    • POSITIVE
  • left end position:
    • 112
  • centisome position:
    • 1.6736401
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12839&oldid=48263"