Difference between revisions of "Tiso gene 18976"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTPRATPHYD-RXN HISTPRATPHYD-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme....")
(Created page with "Category:Gene == Gene Tiso_gene_18976 == * right end position: ** 2441 * transcription direction: ** POSITIVE * left end position: ** 13 * centisome position: ** 0.4847129...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTPRATPHYD-RXN HISTPRATPHYD-RXN] ==
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== Gene Tiso_gene_18976 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2441
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.6.1.31 EC-3.6.1.31]
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** POSITIVE
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* left end position:
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** 13
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* centisome position:
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** 0.4847129   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN]]
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** 1 [[PHOSPHORIBOSYL-ATP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[PHOSPHORIBOSYL-AMP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 1-(5-phospho-β-D-ribosyl)-ATP[c] '''+''' 1 H2O[c] '''=>''' 1 diphosphate[c] '''+''' 2 H+[c] '''+''' 1 1-(5-phospho-β-D-ribosyl)-AMP[c]
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* Reaction: [[RXN-10815]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_11297]]
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* [[PWY-1581]]
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** [[pantograph]]-[[athaliana]]
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* [[PWY-7432]]
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** [[pantograph]]-[[synechocystis]]
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* [[TYRFUMCAT-PWY]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-1422]]
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** [[pantograph]]-[[creinhardtii]]
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* [[PWY-6318]]
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== Pathways ==
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* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2441}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22828 22828]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=13}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04035 R04035]
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{{#set: centisome position=0.4847129    }}
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* UNIPROT:
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{{#set: reaction associated=4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN|RXN-10815}}
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** [http://www.uniprot.org/uniprot/P44434 P44434]
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{{#set: pathway associated=PWY-1581|PWY-7432|TYRFUMCAT-PWY|PWY-1422|PWY-6318}}
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** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
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** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
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** [http://www.uniprot.org/uniprot/Q02130 Q02130]
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** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
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** [http://www.uniprot.org/uniprot/Q9K0J4 Q9K0J4]
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** [http://www.uniprot.org/uniprot/O34912 O34912]
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** [http://www.uniprot.org/uniprot/P0A5B1 P0A5B1]
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** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
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** [http://www.uniprot.org/uniprot/Q9HUB6 Q9HUB6]
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** [http://www.uniprot.org/uniprot/Q57750 Q57750]
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** [http://www.uniprot.org/uniprot/O27344 O27344]
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** [http://www.uniprot.org/uniprot/Q9JVJ9 Q9JVJ9]
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** [http://www.uniprot.org/uniprot/O67780 O67780]
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** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
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** [http://www.uniprot.org/uniprot/P26722 P26722]
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** [http://www.uniprot.org/uniprot/P45353 P45353]
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** [http://www.uniprot.org/uniprot/Q12670 Q12670]
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** [http://www.uniprot.org/uniprot/P50935 P50935]
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** [http://www.uniprot.org/uniprot/P00815 P00815]
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** [http://www.uniprot.org/uniprot/P07685 P07685]
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** [http://www.uniprot.org/uniprot/O59667 O59667]
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** [http://www.uniprot.org/uniprot/O82768 O82768]
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** [http://www.uniprot.org/uniprot/P10367 P10367]
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** [http://www.uniprot.org/uniprot/P06989 P06989]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-3.6.1.31}}
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{{#set: gene associated=Tiso_gene_11297}}
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{{#set: in pathway=HISTSYN-PWY}}
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{{#set: reconstruction category=orthology|manual}}
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{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-synechocystis|orthology-esiliculosus|manual-primary_network}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:23, 21 March 2018

Gene Tiso_gene_18976

  • right end position:
    • 2441
  • transcription direction:
    • POSITIVE
  • left end position:
    • 13
  • centisome position:
    • 0.4847129
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18976&oldid=48315"