Difference between revisions of "Tiso gene 7417"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AICARTRANSFORM-RXN AICARTRANSFORM-RXN] == * direction: ** REVERSIBLE * common name: ** bifunctional...")
(Created page with "Category:Gene == Gene Tiso_gene_7417 == * right end position: ** 4353 * transcription direction: ** POSITIVE * left end position: ** 2867 * centisome position: ** 25.63712...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AICARTRANSFORM-RXN AICARTRANSFORM-RXN] ==
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== Gene Tiso_gene_7417 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 4353
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* common name:
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* transcription direction:
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** bifunctional_purine_biosynthesis
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.1.2.3 EC-2.1.2.3]
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** 2867
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* centisome position:
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** 25.637129   
 
* Synonym(s):
 
* Synonym(s):
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** 5-aminoimidazole-4-carboxamide ribonucleotide transformylase
 
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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** 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[AICAR]][c] '''<=>''' 1 [[THF-GLU-N]][c] '''+''' 1 [[PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 an N10-formyl-tetrahydrofolate[c] '''+''' 1 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide[c] '''<=>''' 1 a tetrahydrofolate[c] '''+''' 1 5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_18420]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-6123]], inosine-5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=4353}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22192 22192]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=2867}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04560 R04560]
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{{#set: centisome position=25.637129    }}
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* UNIPROT:
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{{#set: reaction associated=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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** [http://www.uniprot.org/uniprot/P43852 P43852]
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** [http://www.uniprot.org/uniprot/P12048 P12048]
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** [http://www.uniprot.org/uniprot/P31335 P31335]
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** [http://www.uniprot.org/uniprot/P26978 P26978]
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** [http://www.uniprot.org/uniprot/P15639 P15639]
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** [http://www.uniprot.org/uniprot/Q9PNY2 Q9PNY2]
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** [http://www.uniprot.org/uniprot/Q9JUQ8 Q9JUQ8]
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** [http://www.uniprot.org/uniprot/P31939 P31939]
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** [http://www.uniprot.org/uniprot/Q59493 Q59493]
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** [http://www.uniprot.org/uniprot/P38009 P38009]
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** [http://www.uniprot.org/uniprot/P54113 P54113]
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** [http://www.uniprot.org/uniprot/O64767 O64767]
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** [http://www.uniprot.org/uniprot/O74928 O74928]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=bifunctional_purine_biosynthesis}}
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{{#set: ec number=EC-2.1.2.3}}
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{{#set: common name=5-aminoimidazole-4-carboxamide ribonucleotide transformylase}}
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{{#set: gene associated=Tiso_gene_18420}}
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{{#set: in pathway=PWY-6123|PWY-6124}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:23, 21 March 2018

Gene Tiso_gene_7417

  • right end position:
    • 4353
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2867
  • centisome position:
    • 25.637129
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7417&oldid=48332"