Difference between revisions of "Tiso gene 14462"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOXIN-REDUCT-NADPH-RXN THIOREDOXIN-REDUCT-NADPH-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
(Created page with "Category:Gene == Gene Tiso_gene_14462 == * right end position: ** 4221 * transcription direction: ** NEGATIVE * left end position: ** 1112 * centisome position: ** 19.7128...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOXIN-REDUCT-NADPH-RXN THIOREDOXIN-REDUCT-NADPH-RXN] ==
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== Gene Tiso_gene_14462 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4221
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* common name:
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* transcription direction:
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** nucleoredoxin
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** NEGATIVE
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** ORF
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* left end position:
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** thioredoxin_reductase_tr1
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** 1112
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** thioredoxin_reductase
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* centisome position:
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* ec number:
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** 19.712816   
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** [http://enzyme.expasy.org/EC/1.8.1.9 EC-1.8.1.9]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[KDOTRANS-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Red-Thioredoxin]][c]
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* With common name(s):
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** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 an oxidized thioredoxin[c] '''=>''' 1 NADP+[c] '''+''' 1 a reduced thioredoxin[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_16927]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_475]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18783]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15704]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[THIOREDOX-PWY]], thioredoxin pathway: [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOX-PWY THIOREDOX-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[KDOSYN-PWY]]
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* [[PWY-7675]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=4221}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20345 20345]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=1112}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02016 R02016]
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{{#set: centisome position=19.712816    }}
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* UNIPROT:
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{{#set: reaction associated=KDOTRANS-RXN}}
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** [http://www.uniprot.org/uniprot/Q05741 Q05741]
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{{#set: pathway associated=KDOSYN-PWY|PWY-7675}}
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** [http://www.uniprot.org/uniprot/P56431 P56431]
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** [http://www.uniprot.org/uniprot/O28718 O28718]
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** [http://www.uniprot.org/uniprot/P80880 P80880]
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** [http://www.uniprot.org/uniprot/P43496 P43496]
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** [http://www.uniprot.org/uniprot/P94284 P94284]
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** [http://www.uniprot.org/uniprot/O66790 O66790]
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** [http://www.uniprot.org/uniprot/Q9PIY1 Q9PIY1]
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** [http://www.uniprot.org/uniprot/P47348 P47348]
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** [http://www.uniprot.org/uniprot/Q9CH02 Q9CH02]
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** [http://www.uniprot.org/uniprot/Q7M0Y2 Q7M0Y2]
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** [http://www.uniprot.org/uniprot/O26804 O26804]
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** [http://www.uniprot.org/uniprot/Q9JU23 Q9JU23]
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** [http://www.uniprot.org/uniprot/P43788 P43788]
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** [http://www.uniprot.org/uniprot/Q58931 Q58931]
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** [http://www.uniprot.org/uniprot/Q9CF34 Q9CF34]
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** [http://www.uniprot.org/uniprot/P0A9P4 P0A9P4]
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** [http://www.uniprot.org/uniprot/P23160 P23160]
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** [http://www.uniprot.org/uniprot/P39916 P39916]
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** [http://www.uniprot.org/uniprot/Q39242 Q39242]
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** [http://www.uniprot.org/uniprot/Q39243 Q39243]
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** [http://www.uniprot.org/uniprot/P38816 P38816]
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** [http://www.uniprot.org/uniprot/Q25861 Q25861]
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** [http://www.uniprot.org/uniprot/P29509 P29509]
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** [http://www.uniprot.org/uniprot/P52213 P52213]
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** [http://www.uniprot.org/uniprot/Q16881 Q16881]
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** [http://www.uniprot.org/uniprot/P75531 P75531]
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** [http://www.uniprot.org/uniprot/P74746 P74746]
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** [http://www.uniprot.org/uniprot/P46843 P46843]
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** [http://www.uniprot.org/uniprot/O54535 O54535]
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** [http://www.uniprot.org/uniprot/Q39951 Q39951]
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** [http://www.uniprot.org/uniprot/Q92375 Q92375]
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** [http://www.uniprot.org/uniprot/P52215 P52215]
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** [http://www.uniprot.org/uniprot/P51978 P51978]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=nucleoredoxin}}
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{{#set: common name=ORF}}
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{{#set: common name=thioredoxin_reductase_tr1}}
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{{#set: common name=thioredoxin_reductase}}
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{{#set: ec number=EC-1.8.1.9}}
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{{#set: gene associated=Tiso_gene_16927|Tiso_gene_475|Tiso_gene_18783|Tiso_gene_15704}}
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{{#set: in pathway=THIOREDOX-PWY}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:23, 21 March 2018

Gene Tiso_gene_14462

  • right end position:
    • 4221
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 1112
  • centisome position:
    • 19.712816
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14462&oldid=48408"