Difference between revisions of "KETOACYLCOATHIOL-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_7953 == * left end position: ** 7945 * transcription direction: ** POSITIVE * right end position: ** 10584 * centisome position: ** 74.4611...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOACYLCOATHIOL-RXN KETOACYLCOATHIOL-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** thiol...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_7953 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOACYLCOATHIOL-RXN KETOACYLCOATHIOL-RXN] ==
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* left end position:
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* direction:
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** 7945
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** thiolase
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* right end position:
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** acetyl-_c-acetyltransferase
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** 10584
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** 3-ketoacyl-_thiolase
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* centisome position:
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* ec number:
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** 74.461105   
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
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** Beta-ketothiolase
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-6883]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[3-KETOACYL-COA]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[ACETYL-COA]][c]
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***automated-name-match
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* With common name(s):
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** experimental_annotation
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** 1 a 3-oxoacyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 acetyl-CoA[c]
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***automated-name-match
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** [[pantograph]]-[[esiliculosus]]
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-4302]]
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* Gene: [[Tiso_gene_10116]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_17451]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_3856]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_3855]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_15327]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7288]], fatty acid β-oxidation (peroxisome, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7288 PWY-7288]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=7945}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21564 21564]
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{{#set: right end position=10584}}
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* PIR:
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{{#set: centisome position=74.461105    }}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAB XURTAB]
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{{#set: reaction associated=RXN-6883}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAA XURTAA]
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{{#set: pathway associated=PWY-4302}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURT XURT]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUHUAB XUHUAB]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUEC XUEC]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52165 T52165]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52110 T52110]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07989 T07989]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72532 S72532]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57792 S57792]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36838 S36838]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S33637 S33637]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S22784 S22784]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JS0624 JS0624]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H64890 H64890]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00391 R00391]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P77525 P77525]
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** [http://www.uniprot.org/uniprot/P28790 P28790]
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** [http://www.uniprot.org/uniprot/P27796 P27796]
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** [http://www.uniprot.org/uniprot/Q08375 Q08375]
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** [http://www.uniprot.org/uniprot/Q05493 Q05493]
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** [http://www.uniprot.org/uniprot/Q42918 Q42918]
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** [http://www.uniprot.org/uniprot/Q43742 Q43742]
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** [http://www.uniprot.org/uniprot/Q56WD9 Q56WD9]
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** [http://www.uniprot.org/uniprot/Q570C8 Q570C8]
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** [http://www.uniprot.org/uniprot/P21151 P21151]
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** [http://www.uniprot.org/uniprot/P09110 P09110]
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** [http://www.uniprot.org/uniprot/P13437 P13437]
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** [http://www.uniprot.org/uniprot/P21775 P21775]
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** [http://www.uniprot.org/uniprot/P07871 P07871]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=thiolase}}
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{{#set: common name=acetyl-_c-acetyltransferase}}
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{{#set: common name=3-ketoacyl-_thiolase}}
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{{#set: ec number=EC-2.3.1.16}}
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{{#set: common name=Beta-ketothiolase}}
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{{#set: gene associated=Tiso_gene_10116|Tiso_gene_17451|Tiso_gene_3856|Tiso_gene_3855|Tiso_gene_15327}}
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{{#set: in pathway=PWY-5136|PWY-7288|FAO-PWY|PWY66-391}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:24, 21 March 2018

Reaction KETOACYLCOATHIOL-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thiolase
    • acetyl-_c-acetyltransferase
    • 3-ketoacyl-_thiolase
  • ec number:
  • Synonym(s):
    • Beta-ketothiolase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5136, fatty acid β-oxidation II (peroxisome): PWY-5136
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7288, fatty acid β-oxidation (peroxisome, yeast): PWY-7288
    • 3 reactions found over 5 reactions in the full pathway
  • FAO-PWY, fatty acid β-oxidation I: FAO-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY66-391, fatty acid β-oxidation VI (peroxisome): PWY66-391
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=KETOACYLCOATHIOL-RXN&oldid=48457"