Difference between revisions of "ORNITHINE-CYCLODEAMINASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYTIDEAM2-RXN CYTIDEAM2-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-CYCLODEAMINASE-RXN ORNITHINE-CYCLODEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYTIDEAM2-RXN CYTIDEAM2-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-CYCLODEAMINASE-RXN ORNITHINE-CYCLODEAMINASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** ornithine_cyclodeaminase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.4.5 EC-3.5.4.5]
+
** [http://enzyme.expasy.org/EC/4.3.1.12 EC-4.3.1.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[CYTIDINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[URIDINE]][c]
+
** 1 [[L-ORNITHINE]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 cytidine[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 uridine[c]
+
** 1 L-ornithine[c] '''=>''' 1 L-proline[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_1843]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_17134]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7193]], pyrimidine ribonucleosides salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7193 PWY-7193]
+
* [[ORN-AMINOPENTANOATE-CAT-PWY]], L-ornithine degradation I (L-proline biosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=ORN-AMINOPENTANOATE-CAT-PWY ORN-AMINOPENTANOATE-CAT-PWY]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY0-1295]], pyrimidine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1295 PWY0-1295]
+
* [[ARG-GLU-PWY]], L-arginine degradation VII (arginase 3 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-GLU-PWY ARG-GLU-PWY]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-6556]], pyrimidine ribonucleosides salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6556 PWY-6556]
+
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16069 16069]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24368 24368]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01878 R01878]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00671 R00671]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P47718 P47718]
+
** [http://www.uniprot.org/uniprot/Q59701 Q59701]
−
** [http://www.uniprot.org/uniprot/P0ABF6 P0ABF6]
+
** [http://www.uniprot.org/uniprot/P09773 P09773]
−
** [http://www.uniprot.org/uniprot/P47298 P47298]
+
** [http://www.uniprot.org/uniprot/P33728 P33728]
−
** [http://www.uniprot.org/uniprot/Q9CFM8 Q9CFM8]
+
** [http://www.uniprot.org/uniprot/O68052 O68052]
−
** [http://www.uniprot.org/uniprot/P32320 P32320]
+
** [http://www.uniprot.org/uniprot/Q9WWA2 Q9WWA2]
−
** [http://www.uniprot.org/uniprot/P75051 P75051]
+
−
** [http://www.uniprot.org/uniprot/Q9SU87 Q9SU87]
+
−
** [http://www.uniprot.org/uniprot/Q9SU86 Q9SU86]
+
−
** [http://www.uniprot.org/uniprot/O65571 O65571]
+
−
** [http://www.uniprot.org/uniprot/Q9S847 Q9S847]
+
−
** [http://www.uniprot.org/uniprot/Q9S7L8 Q9S7L8]
+
−
** [http://www.uniprot.org/uniprot/Q9S7S2 Q9S7S2]
+
−
** [http://www.uniprot.org/uniprot/O65896 O65896]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-3.5.4.5}}
+
{{#set: common name=ornithine_cyclodeaminase}}
−
{{#set: in pathway=PWY-7193|PWY0-1295|PWY-6556}}
+
{{#set: ec number=EC-4.3.1.12}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: gene associated=Tiso_gene_1843|Tiso_gene_17134}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: in pathway=ORN-AMINOPENTANOATE-CAT-PWY|ARG-GLU-PWY}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:32, 21 March 2018

Reaction ORNITHINE-CYCLODEAMINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ornithine_cyclodeaminase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-ornithine[c] => 1 L-proline[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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