Difference between revisions of "Tiso gene 1163"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPERMINE-SYNTHASE-RXN SPERMINE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http...")
(Created page with "Category:Gene == Gene Tiso_gene_1163 == * right end position: ** 14054 * transcription direction: ** POSITIVE * left end position: ** 12300 * centisome position: ** 48.240...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPERMINE-SYNTHASE-RXN SPERMINE-SYNTHASE-RXN] ==
+
== Gene Tiso_gene_1163 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 14054
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/2.5.1.22 EC-2.5.1.22]
+
** POSITIVE
 +
* left end position:
 +
** 12300
 +
* centisome position:
 +
** 48.240967   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[DIACYLGLYKIN-RXN]]
−
** 1 [[SPERMIDINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''=>''' 1 [[SPERMINE]][c] '''+''' 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[PROTON]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 spermidine[c] '''+''' 1 S-adenosyl 3-(methylthio)propylamine[c] '''=>''' 1 spermine[c] '''+''' 1 S-methyl-5'-thioadenosine[c] '''+''' 1 H+[c]
+
* Reaction: [[NAD-KIN-RXN]]
−
 
+
** Source: [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
*** Assignment: ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[RXN3DJ-11417]]
−
* [[Tiso_gene_17803]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: automated-name-match
−
* [[Tiso_gene_17081]]
+
* Reaction: [[SPHINGANINE-KINASE-RXN]]
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
== Pathways  ==
+
−
* [[ARGSPECAT-PWY]], spermine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ARGSPECAT-PWY ARGSPECAT-PWY]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[POLYAMINSYN3-PWY]], superpathway of polyamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=POLYAMINSYN3-PWY POLYAMINSYN3-PWY]
+
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
 
** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
−
*** Tool: [[pantograph]]
+
== Pathways associated ==
−
** Source: [[orthology-esiliculosus]]
+
* [[PWY3DJ-11470]]
−
*** Tool: [[pantograph]]
+
* [[PWY-7268]]
 +
* [[PWY-7269]]
 +
* [[PWY-7817]]
 +
* [[PWY-5129]]
 +
* [[PWY-5083]]
 +
* [[NADPHOS-DEPHOS-PWY-1]]
 +
* [[PWY-7119]]
 +
* [[PWY-7039]]
 +
* [[NADPHOS-DEPHOS-PWY]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=14054}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19973 19973]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=12300}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02869 R02869]
+
{{#set: centisome position=48.240967    }}
−
* UNIPROT:
+
{{#set: reaction associated=DIACYLGLYKIN-RXN|NAD-KIN-RXN|RXN3DJ-11417|SPHINGANINE-KINASE-RXN}}
−
** [http://www.uniprot.org/uniprot/P52788 P52788]
+
{{#set: pathway associated=PWY3DJ-11470|PWY-7268|PWY-7269|PWY-7817|PWY-5129|PWY-5083|NADPHOS-DEPHOS-PWY-1|PWY-7119|PWY-7039|NADPHOS-DEPHOS-PWY}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: ec number=EC-2.5.1.22}}
+
−
{{#set: gene associated=Tiso_gene_17803|Tiso_gene_17081}}
+
−
{{#set: in pathway=ARGSPECAT-PWY|POLYAMINSYN3-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-creinhardtii|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 21:24, 21 March 2018

Gene Tiso_gene_1163

  • right end position:
    • 14054
  • transcription direction:
    • POSITIVE
  • left end position:
    • 12300
  • centisome position:
    • 48.240967
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1163&oldid=48537"