Difference between revisions of "Tiso gene 15256"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7644 RXN-7644] == * direction: ** REVERSIBLE * common name: ** D-sorbitol 2-dehydrogenase ** po...")
(Created page with "Category:Gene == Gene Tiso_gene_15256 == * right end position: ** 5023 * transcription direction: ** NEGATIVE * left end position: ** 2323 * centisome position: ** 45.2914...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7644 RXN-7644] ==
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== Gene Tiso_gene_15256 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 5023
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* common name:
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* transcription direction:
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** D-sorbitol 2-dehydrogenase
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** NEGATIVE
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** polyketide_synthase
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* left end position:
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** l-iditol_2-dehydrogenase
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** 2323
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.1.1.14 EC-1.1.1.14]
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** 45.29148   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACID-PHOSPHATASE-RXN]]
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** 1 [[SORBITOL]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-15382]][c] '''+''' 1 [[NADH]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 D-sorbitol[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 keto-D-fructose[c] '''+''' 1 NADH[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_5424]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6562]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18533]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_15088]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6563]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5425]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-4101]], D-sorbitol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4101 PWY-4101]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Reaction: [[RXN-5822]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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* Reaction: [[RXNQT-4191]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[PWY-6907]]
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* [[PWY-6348]]
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* [[PWY-6908]]
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* [[PWY-7356]]
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* [[NAD-BIOSYNTHESIS-II]]
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* [[PWY-5083]]
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* [[NADPHOS-DEPHOS-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=5023}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33031 33031]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=2323}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00875 R00875]
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{{#set: centisome position=45.29148    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction associated=ACID-PHOSPHATASE-RXN|RXN-5822|RXNQT-4191}}
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{{#set: common name=D-sorbitol 2-dehydrogenase}}
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{{#set: pathway associated=PWY-6907|PWY-6348|PWY-6908|PWY-7356|NAD-BIOSYNTHESIS-II|PWY-5083|NADPHOS-DEPHOS-PWY}}
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{{#set: common name=polyketide_synthase}}
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{{#set: common name=l-iditol_2-dehydrogenase}}
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{{#set: ec number=EC-1.1.1.14}}
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{{#set: gene associated=Tiso_gene_5424|Tiso_gene_6562|Tiso_gene_18533|Tiso_gene_15088|Tiso_gene_6563|Tiso_gene_5425}}
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{{#set: in pathway=PWY-4101}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:24, 21 March 2018

Gene Tiso_gene_15256

  • right end position:
    • 5023
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 2323
  • centisome position:
    • 45.29148
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_15256&oldid=48551"