Difference between revisions of "Tiso gene 2320"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNONDEHYDRAT-RXN MANNONDEHYDRAT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** mannonate...")
(Created page with "Category:Gene == Gene Tiso_gene_2320 == * right end position: ** 4897 * transcription direction: ** POSITIVE * left end position: ** 4629 * centisome position: ** 16.49620...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNONDEHYDRAT-RXN MANNONDEHYDRAT-RXN] ==
+
== Gene Tiso_gene_2320 ==
* direction:
+
* right end position:
** LEFT-TO-RIGHT
+
** 4897
* common name:
+
* transcription direction:
** mannonate_dehydratase
+
** POSITIVE
* ec number:
+
* left end position:
** [http://enzyme.expasy.org/EC/4.2.1.8 EC-4.2.1.8]
+
** 4629
 +
* centisome position:
 +
** 16.496204   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reactions associated ==
* With identifiers:
+
* Reaction: [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
** 1 [[D-MANNONATE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[2-DEHYDRO-3-DEOXY-D-GLUCONATE]][c]
+
* With common name(s):
+
** 1 D-mannonate[c] '''=>''' 1 H2O[c] '''+''' 1 2-dehydro-3-deoxy-D-gluconate[c]
+
 
+
== Genes associated with this reaction  ==
+
Genes have been associated with this reaction based on different elements listed below.
+
* [[Tiso_gene_8331]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
== Pathways  ==
+
* [[PWY-7242]], D-fructuronate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7242 PWY-7242]
+
** '''2''' reactions found over '''4''' reactions in the full pathway
+
== Reconstruction information  ==
+
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
== Pathways associated ==
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: right end position=4897}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20097 20097]
+
{{#set: transcription direction=POSITIVE}}
* LIGAND-RXN:
+
{{#set: left end position=4629}}
** [http://www.genome.jp/dbget-bin/www_bget?R05606 R05606]
+
{{#set: centisome position=16.496204    }}
* UNIPROT:
+
{{#set: reaction associated=RNA-DIRECTED-DNA-POLYMERASE-RXN}}
** [http://www.uniprot.org/uniprot/P44488 P44488]
+
** [http://www.uniprot.org/uniprot/Q9CF50 Q9CF50]
+
** [http://www.uniprot.org/uniprot/P24215 P24215]
+
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=mannonate_dehydratase}}
+
{{#set: ec number=EC-4.2.1.8}}
+
{{#set: gene associated=Tiso_gene_8331}}
+
{{#set: in pathway=PWY-7242}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:24, 21 March 2018

Gene Tiso_gene_2320

  • right end position:
    • 4897
  • transcription direction:
    • POSITIVE
  • left end position:
    • 4629
  • centisome position:
    • 16.496204
  • Synonym(s):

Reactions associated

Pathways associated

External links