Difference between revisions of "LEUCINE--TRNA-LIGASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5466 RXN-5466] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LEUCINE--TRNA-LIGASE-RXN LEUCINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5466 RXN-5466] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LEUCINE--TRNA-LIGASE-RXN LEUCINE--TRNA-LIGASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** leucine--trna_ligase
 +
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.1.258 EC-2.4.1.258]
+
** [http://enzyme.expasy.org/EC/6.1.1.4 EC-6.1.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-171]][c] '''+''' 1 [[CPD-5164]][c] '''=>''' 1 [[DOLICHOLP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-5165]][c]
+
** 1 [[LEU]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[LEU-tRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Charged-LEU-tRNAs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a dolichyl β-D-mannosyl phosphate[c] '''+''' 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''=>''' 1 a dolichyl phosphate[c] '''+''' 1 H+[c] '''+''' 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→3)-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c]
+
** 1 L-leucine[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAleu[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 an L-leucyl-[tRNAleu][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_8232]]
+
* Gene: [[Tiso_gene_11524]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_15439]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
+
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
−
** '''19''' reactions found over '''19''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-experimental_annotation]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29530 29530]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11688 11688]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06258 R06258]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03657 R03657]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/O27552 O27552]
 +
** [http://www.uniprot.org/uniprot/P56457 P56457]
 +
** [http://www.uniprot.org/uniprot/O51267 O51267]
 +
** [http://www.uniprot.org/uniprot/O83595 O83595]
 +
** [http://www.uniprot.org/uniprot/O84211 O84211]
 +
** [http://www.uniprot.org/uniprot/Q9Z930 Q9Z930]
 +
** [http://www.uniprot.org/uniprot/P47508 P47508]
 +
** [http://www.uniprot.org/uniprot/P36430 P36430]
 +
** [http://www.uniprot.org/uniprot/O66680 O66680]
 +
** [http://www.uniprot.org/uniprot/O67646 O67646]
 +
** [http://www.uniprot.org/uniprot/Q9ZDB1 Q9ZDB1]
 +
** [http://www.uniprot.org/uniprot/Q9WY15 Q9WY15]
 +
** [http://www.uniprot.org/uniprot/Q9PNK3 Q9PNK3]
 +
** [http://www.uniprot.org/uniprot/Q9JW39 Q9JW39]
 +
** [http://www.uniprot.org/uniprot/Q9ZJ63 Q9ZJ63]
 +
** [http://www.uniprot.org/uniprot/Q9JXT2 Q9JXT2]
 +
** [http://www.uniprot.org/uniprot/P43827 P43827]
 +
** [http://www.uniprot.org/uniprot/O58698 O58698]
 +
** [http://www.uniprot.org/uniprot/Q9CHB6 Q9CHB6]
 +
** [http://www.uniprot.org/uniprot/P26637 P26637]
 +
** [http://www.uniprot.org/uniprot/P75398 P75398]
 +
** [http://www.uniprot.org/uniprot/P73274 P73274]
 +
** [http://www.uniprot.org/uniprot/Q48955 Q48955]
 +
** [http://www.uniprot.org/uniprot/Q48964 Q48964]
 +
** [http://www.uniprot.org/uniprot/Q49051 Q49051]
 +
** [http://www.uniprot.org/uniprot/P11325 P11325]
 +
** [http://www.uniprot.org/uniprot/P07813 P07813]
 +
** [http://www.uniprot.org/uniprot/P10857 P10857]
 +
** [http://www.uniprot.org/uniprot/P15181 P15181]
 +
** [http://www.uniprot.org/uniprot/Q50192 Q50192]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.4.1.258}}
+
{{#set: common name=leucine--trna_ligase}}
−
{{#set: gene associated=Tiso_gene_8232}}
+
{{#set: common name=ORF}}
−
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
+
{{#set: ec number=EC-6.1.1.4}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=Tiso_gene_11524|Tiso_gene_15439}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=TRNA-CHARGING-PWY}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:32, 21 March 2018

Reaction LEUCINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • leucine--trna_ligase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-leucine[c] + 1 ATP[c] + 1 a tRNAleu[c] => 1 diphosphate[c] + 1 AMP[c] + 1 an L-leucyl-[tRNAleu][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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