Difference between revisions of "ISOLEUCINE--TRNA-LIGASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTAMINOTRANS-RXN HISTAMINOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** histidino...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOLEUCINE--TRNA-LIGASE-RXN ISOLEUCINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTAMINOTRANS-RXN HISTAMINOTRANS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOLEUCINE--TRNA-LIGASE-RXN ISOLEUCINE--TRNA-LIGASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** histidinol_phosphateaminotransferase
+
** isoleucine--trna_cytoplasmic
 +
** isoleucine--trna_ligase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.9 EC-2.6.1.9]
+
** [http://enzyme.expasy.org/EC/6.1.1.5 EC-6.1.1.5]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[IMIDAZOLE-ACETOL-P]][c] '''+''' 1 [[GLT]][c] '''=>''' 1 [[L-HISTIDINOL-P]][c] '''+''' 1 [[2-KETOGLUTARATE]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[ILE-tRNAs]][c] '''+''' 1 [[ILE]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-ILE-tRNAs]][c] '''+''' 1 [[AMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 imidazole acetol-phosphate[c] '''+''' 1 L-glutamate[c] '''=>''' 1 L-histidinol-phosphate[c] '''+''' 1 2-oxoglutarate[c]
+
** 1 ATP[c] '''+''' 1 a tRNAile[c] '''+''' 1 L-isoleucine[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-isoleucyl-[tRNAile][c] '''+''' 1 AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10680]]
+
* Gene: [[Tiso_gene_12496]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[synechocystis]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[creinhardtii]]
+
* Gene: [[Tiso_gene_11779]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_10679]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
+
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-creinhardtii]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23744 23744]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11060 11060]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03243 R03243]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03656 R03656]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P17731 P17731]
+
** [http://www.uniprot.org/uniprot/P18330 P18330]
−
** [http://www.uniprot.org/uniprot/P17736 P17736]
+
** [http://www.uniprot.org/uniprot/P36422 P36422]
−
** [http://www.uniprot.org/uniprot/P56099 P56099]
+
** [http://www.uniprot.org/uniprot/O29622 O29622]
−
** [http://www.uniprot.org/uniprot/Q9PII2 Q9PII2]
+
** [http://www.uniprot.org/uniprot/P47587 P47587]
−
** [http://www.uniprot.org/uniprot/Q02135 Q02135]
+
** [http://www.uniprot.org/uniprot/Q9ZCU4 Q9ZCU4]
−
** [http://www.uniprot.org/uniprot/Q58365 Q58365]
+
** [http://www.uniprot.org/uniprot/P46213 P46213]
−
** [http://www.uniprot.org/uniprot/Q9JTH8 Q9JTH8]
+
** [http://www.uniprot.org/uniprot/P41257 P41257]
−
** [http://www.uniprot.org/uniprot/P44423 P44423]
+
** [http://www.uniprot.org/uniprot/Q9JVY4 Q9JVY4]
−
** [http://www.uniprot.org/uniprot/P16246 P16246]
+
** [http://www.uniprot.org/uniprot/Q58357 Q58357]
−
** [http://www.uniprot.org/uniprot/P28735 P28735]
+
** [http://www.uniprot.org/uniprot/O83466 O83466]
−
** [http://www.uniprot.org/uniprot/P36605 P36605]
+
** [http://www.uniprot.org/uniprot/Q9Z972 Q9Z972]
−
** [http://www.uniprot.org/uniprot/P07172 P07172]
+
** [http://www.uniprot.org/uniprot/P56456 P56456]
−
** [http://www.uniprot.org/uniprot/O82030 O82030]
+
** [http://www.uniprot.org/uniprot/O58792 O58792]
−
** [http://www.uniprot.org/uniprot/Q9X7B8 Q9X7B8]
+
** [http://www.uniprot.org/uniprot/O84022 O84022]
−
** [http://www.uniprot.org/uniprot/P10369 P10369]
+
** [http://www.uniprot.org/uniprot/Q9ZJJ1 Q9ZJJ1]
−
** [http://www.uniprot.org/uniprot/P06986 P06986]
+
** [http://www.uniprot.org/uniprot/O66651 O66651]
 +
** [http://www.uniprot.org/uniprot/Q9CEH8 Q9CEH8]
 +
** [http://www.uniprot.org/uniprot/O27428 O27428]
 +
** [http://www.uniprot.org/uniprot/Q45477 Q45477]
 +
** [http://www.uniprot.org/uniprot/O51773 O51773]
 +
** [http://www.uniprot.org/uniprot/P46207 P46207]
 +
** [http://www.uniprot.org/uniprot/P41252 P41252]
 +
** [http://www.uniprot.org/uniprot/P41972 P41972]
 +
** [http://www.uniprot.org/uniprot/P48526 P48526]
 +
** [http://www.uniprot.org/uniprot/P75258 P75258]
 +
** [http://www.uniprot.org/uniprot/P73505 P73505]
 +
** [http://www.uniprot.org/uniprot/Q49024 Q49024]
 +
** [http://www.uniprot.org/uniprot/Q49074 Q49074]
 +
** [http://www.uniprot.org/uniprot/P43824 P43824]
 +
** [http://www.uniprot.org/uniprot/P09436 P09436]
 +
** [http://www.uniprot.org/uniprot/P00956 P00956]
 +
** [http://www.uniprot.org/uniprot/Q94425 Q94425]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=histidinol_phosphateaminotransferase}}
+
{{#set: common name=isoleucine--trna_cytoplasmic}}
−
{{#set: ec number=EC-2.6.1.9}}
+
{{#set: common name=isoleucine--trna_ligase}}
−
{{#set: gene associated=Tiso_gene_10680|Tiso_gene_10679}}
+
{{#set: ec number=EC-6.1.1.5}}
−
{{#set: in pathway=HISTSYN-PWY}}
+
{{#set: gene associated=Tiso_gene_12496|Tiso_gene_11779}}
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
{{#set: in pathway=TRNA-CHARGING-PWY}}
−
{{#set: reconstruction source=orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:25, 21 March 2018

Reaction ISOLEUCINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • isoleucine--trna_cytoplasmic
    • isoleucine--trna_ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 a tRNAile[c] + 1 L-isoleucine[c] => 1 diphosphate[c] + 1 an L-isoleucyl-[tRNAile][c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ISOLEUCINE--TRNA-LIGASE-RXN&oldid=48574"