Difference between revisions of "4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_16154 == * left end position: ** 3231 * transcription direction: ** POSITIVE * right end position: ** 3420 * centisome position: ** 71.0265...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN 4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_16154 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN 4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN] ==
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* left end position:
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* direction:
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** 3231
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** probable_gamma_hydroxybutyrate_dehydrogenase
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* right end position:
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** gamma_hydroxybutyrate_dehydrogenase
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** 3420
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.1.1.61 EC-1.1.1.61]
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** 71.026596   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[GLYOHMETRANS-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[SUCC-S-ALD]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[4-HYDROXY-BUTYRATE]][c]
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***ec-number
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* With common name(s):
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== Pathways associated ==
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** 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 succinate semialdehyde[c] '''=>''' 1 NAD+[c] '''+''' 1 4-hydroxybutanoate[c]
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* [[PWY-2161]]
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* [[PWY-1622]]
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== Genes associated with this reaction  ==
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* [[PWY-3841]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[1CMET2-PWY]]
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* Gene: [[Tiso_gene_777]]
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* [[PWY-3661]]
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** Source: [[annotation-in-silico_annotation]]
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* [[GLYSYN-PWY]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[PWY-5497]]
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* Gene: [[Tiso_gene_91]]
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* [[PWY-2201]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-181]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[PWY-3661-1]]
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== Pathways  ==
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* [[PWY-5677]], succinate fermentation to butanoate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5677 PWY-5677]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5022]], 4-aminobutanoate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5022 PWY-5022]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=3231}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23948 23948]
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{{#set: right end position=3420}}
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* LIGAND-RXN:
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{{#set: centisome position=71.026596    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01644 R01644]
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{{#set: reaction associated=GLYOHMETRANS-RXN}}
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* UNIPROT:
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{{#set: pathway associated=PWY-2161|PWY-1622|PWY-3841|1CMET2-PWY|PWY-3661|GLYSYN-PWY|PWY-5497|PWY-2201|PWY-181|PWY-3661-1}}
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** [http://www.uniprot.org/uniprot/Q59104 Q59104]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=probable_gamma_hydroxybutyrate_dehydrogenase}}
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{{#set: common name=gamma_hydroxybutyrate_dehydrogenase}}
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{{#set: ec number=EC-1.1.1.61}}
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{{#set: gene associated=Tiso_gene_777|Tiso_gene_91}}
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{{#set: in pathway=PWY-5677|PWY-5022}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:25, 21 March 2018

Reaction 4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • probable_gamma_hydroxybutyrate_dehydrogenase
    • gamma_hydroxybutyrate_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 NADH[c] + 1 succinate semialdehyde[c] => 1 NAD+[c] + 1 4-hydroxybutanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5677, succinate fermentation to butanoate: PWY-5677
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-5022, 4-aminobutanoate degradation V: PWY-5022
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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