Difference between revisions of "Tiso gene 1036"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7674 RXN-7674] == * direction: ** LEFT-TO-RIGHT * common name: ** chlorophyll_chloroplastic * e...")
(Created page with "Category:Gene == Gene Tiso_gene_1036 == * right end position: ** 26368 * transcription direction: ** NEGATIVE * left end position: ** 21161 * centisome position: ** 79.780...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7674 RXN-7674] ==
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== Gene Tiso_gene_1036 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 26368
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* common name:
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* transcription direction:
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** chlorophyll_chloroplastic
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.5.1.62 EC-2.5.1.62]
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** 21161
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* centisome position:
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** 79.78058   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
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** 1 [[CPD-7014]][c] '''+''' 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CHLOROPHYLL-B]][c]
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* With common name(s):
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** 1 chlorophyllide b[c] '''+''' 1 phytyl diphosphate[c] '''+''' 2 H+[c] '''=>''' 1 diphosphate[c] '''+''' 1 chlorophyll b[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_19542]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-5068]], chlorophyll cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=26368}}
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** [http://www.genome.jp/dbget-bin/www_bget?R09067 R09067]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=21161}}
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{{#set: common name=chlorophyll_chloroplastic}}
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{{#set: centisome position=79.78058    }}
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{{#set: ec number=EC-2.5.1.62}}
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{{#set: reaction associated=DNA-DIRECTED-RNA-POLYMERASE-RXN}}
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{{#set: gene associated=Tiso_gene_19542}}
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{{#set: in pathway=PWY-5068}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:25, 21 March 2018

Gene Tiso_gene_1036

  • right end position:
    • 26368
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 21161
  • centisome position:
    • 79.78058
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1036&oldid=48603"