|
|
(One intermediate revision by the same user not shown) |
Line 1: |
Line 1: |
− | [[Category:Reaction]] | + | [[Category:Metabolite]] |
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOLEUCINE--TRNA-LIGASE-RXN ISOLEUCINE--TRNA-LIGASE-RXN] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=apo-Transcarboxylases apo-Transcarboxylases] == |
− | * direction:
| + | |
− | ** LEFT-TO-RIGHT
| + | |
| * common name: | | * common name: |
− | ** isoleucine--trna_cytoplasmic | + | ** an apo-[methylmalonyl-CoA:pyruvate carboxytransferase] |
− | ** isoleucine--trna_ligase
| + | |
− | * ec number:
| + | |
− | ** [http://enzyme.expasy.org/EC/6.1.1.5 EC-6.1.1.5]
| + | |
| * Synonym(s): | | * Synonym(s): |
| + | ** apo-[methylmalonyl-CoA-carboxyltransferase] |
| | | |
− | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
− | * With identifiers:
| + | * [[6.3.4.9-RXN]] |
− | ** 1 [[ILE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[ILE-tRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-ILE-tRNAs]][c] '''+''' 1 [[AMP]][c]
| + | == Reaction(s) known to produce the compound == |
− | * With common name(s):
| + | == Reaction(s) of unknown directionality == |
− | ** 1 L-isoleucine[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAile[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-isoleucyl-[tRNAile][c] '''+''' 1 AMP[c]
| + | |
− | | + | |
− | == Genes associated with this reaction == | + | |
− | Genes have been associated with this reaction based on different elements listed below.
| + | |
− | * [[Tiso_gene_12496]] | + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | ** EXPERIMENTAL_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | ** [[pantograph]]-[[esiliculosus]]
| + | |
− | * [[Tiso_gene_11779]]
| + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | ** EXPERIMENTAL_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | ** [[pantograph]]-[[esiliculosus]]
| + | |
− | == Pathways == | + | |
− | * [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
| + | |
− | ** '''21''' reactions found over '''21''' reactions in the full pathway
| + | |
− | == Reconstruction information == | + | |
− | * Category: [[orthology]]
| + | |
− | ** Source: [[orthology-esiliculosus]]
| + | |
− | *** Tool: [[pantograph]]
| + | |
− | * Category: [[annotation]]
| + | |
− | ** Source: [[annotation-experimental_annotation]]
| + | |
− | *** Tool: [[pathwaytools]]
| + | |
− | ** Source: [[annotation-in-silico_annotation]]
| + | |
− | *** Tool: [[pathwaytools]]
| + | |
| == External links == | | == External links == |
− | * RHEA:
| + | {{#set: common name=an apo-[methylmalonyl-CoA:pyruvate carboxytransferase]}} |
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11060 11060]
| + | {{#set: common name=apo-[methylmalonyl-CoA-carboxyltransferase]}} |
− | * LIGAND-RXN:
| + | {{#set: consumed by=6.3.4.9-RXN}} |
− | ** [http://www.genome.jp/dbget-bin/www_bget?R03656 R03656]
| + | |
− | * UNIPROT:
| + | |
− | ** [http://www.uniprot.org/uniprot/P18330 P18330]
| + | |
− | ** [http://www.uniprot.org/uniprot/P36422 P36422]
| + | |
− | ** [http://www.uniprot.org/uniprot/O29622 O29622]
| + | |
− | ** [http://www.uniprot.org/uniprot/P47587 P47587]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9ZCU4 Q9ZCU4]
| + | |
− | ** [http://www.uniprot.org/uniprot/P46213 P46213]
| + | |
− | ** [http://www.uniprot.org/uniprot/P41257 P41257]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9JVY4 Q9JVY4]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q58357 Q58357]
| + | |
− | ** [http://www.uniprot.org/uniprot/O83466 O83466]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9Z972 Q9Z972]
| + | |
− | ** [http://www.uniprot.org/uniprot/P56456 P56456]
| + | |
− | ** [http://www.uniprot.org/uniprot/O58792 O58792]
| + | |
− | ** [http://www.uniprot.org/uniprot/O84022 O84022]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9ZJJ1 Q9ZJJ1]
| + | |
− | ** [http://www.uniprot.org/uniprot/O66651 O66651]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9CEH8 Q9CEH8]
| + | |
− | ** [http://www.uniprot.org/uniprot/O27428 O27428]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q45477 Q45477]
| + | |
− | ** [http://www.uniprot.org/uniprot/O51773 O51773]
| + | |
− | ** [http://www.uniprot.org/uniprot/P46207 P46207]
| + | |
− | ** [http://www.uniprot.org/uniprot/P41252 P41252]
| + | |
− | ** [http://www.uniprot.org/uniprot/P41972 P41972]
| + | |
− | ** [http://www.uniprot.org/uniprot/P48526 P48526]
| + | |
− | ** [http://www.uniprot.org/uniprot/P75258 P75258]
| + | |
− | ** [http://www.uniprot.org/uniprot/P73505 P73505]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q49024 Q49024]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q49074 Q49074]
| + | |
− | ** [http://www.uniprot.org/uniprot/P43824 P43824]
| + | |
− | ** [http://www.uniprot.org/uniprot/P09436 P09436]
| + | |
− | ** [http://www.uniprot.org/uniprot/P00956 P00956]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q94425 Q94425]
| + | |
− | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
− | {{#set: common name=isoleucine--trna_cytoplasmic}} | + | |
− | {{#set: common name=isoleucine--trna_ligase}} | + | |
− | {{#set: ec number=EC-6.1.1.5}} | + | |
− | {{#set: gene associated=Tiso_gene_12496|Tiso_gene_11779}}
| + | |
− | {{#set: in pathway=TRNA-CHARGING-PWY}}
| + | |
− | {{#set: reconstruction category=orthology|annotation}}
| + | |
− | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
| + | |
− | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |