Difference between revisions of "TREHALOSESYN-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-CYCLODEAMINASE-RXN ORNITHINE-CYCLODEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSESYN-PWY TREHALOSESYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-CYCLODEAMINASE-RXN ORNITHINE-CYCLODEAMINASE-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSESYN-PWY TREHALOSESYN-PWY] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
 
* common name:
 
* common name:
** ornithine_cyclodeaminase
+
** trehalose biosynthesis III
* ec number:
+
** [http://enzyme.expasy.org/EC/4.3.1.12 EC-4.3.1.12]
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''1''' reactions found over '''2''' reactions in the full pathway
** 1 [[L-ORNITHINE]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[AMMONIUM]][c]
+
* [[TREHALOSEPHOSPHA-RXN]]
* With common name(s):
+
** 3 associated gene(s):
** 1 L-ornithine[c] '''=>''' 1 L-proline[c] '''+''' 1 ammonium[c]
+
*** [[Tiso_gene_10840]]
 
+
*** [[Tiso_gene_18196]]
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_14220]]
Genes have been associated with this reaction based on different elements listed below.
+
** 3 reconstruction source(s) associated:
* [[Tiso_gene_17134]]
+
*** [[orthology-athaliana]]
** IN-SILICO_ANNOTATION
+
*** [[annotation-in-silico_annotation]]
***AUTOMATED-NAME-MATCH
+
*** [[orthology-esiliculosus]]
** [[pantograph]]-[[esiliculosus]]
+
== Reaction(s) not found ==
* [[Tiso_gene_1843]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.36-RXN 2.4.1.36-RXN]
** IN-SILICO_ANNOTATION
+
***AUTOMATED-NAME-MATCH
+
** [[pantograph]]-[[esiliculosus]]
+
== Pathways  ==
+
* [[ORN-AMINOPENTANOATE-CAT-PWY]], L-ornithine degradation I (L-proline biosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=ORN-AMINOPENTANOATE-CAT-PWY ORN-AMINOPENTANOATE-CAT-PWY]
+
** '''1''' reactions found over '''1''' reactions in the full pathway
+
* [[ARG-GLU-PWY]], L-arginine degradation VII (arginase 3 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-GLU-PWY ARG-GLU-PWY]
+
** '''2''' reactions found over '''2''' reactions in the full pathway
+
== Reconstruction information  ==
+
* [[orthology]]:
+
** [[pantograph]]:
+
*** [[esiliculosus]]
+
* [[annotation]]:
+
** [[pathwaytools]]:
+
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: taxonomic range=TAX-201174}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24368 24368]
+
{{#set: common name=trehalose biosynthesis III}}
* LIGAND-RXN:
+
{{#set: reaction found=1}}
** [http://www.genome.jp/dbget-bin/www_bget?R00671 R00671]
+
{{#set: total reaction=2}}
* UNIPROT:
+
{{#set: completion rate=50.0}}
** [http://www.uniprot.org/uniprot/Q59701 Q59701]
+
** [http://www.uniprot.org/uniprot/P09773 P09773]
+
** [http://www.uniprot.org/uniprot/P33728 P33728]
+
** [http://www.uniprot.org/uniprot/O68052 O68052]
+
** [http://www.uniprot.org/uniprot/Q9WWA2 Q9WWA2]
+
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=ornithine_cyclodeaminase}}
+
{{#set: ec number=EC-4.3.1.12}}
+
{{#set: gene associated=Tiso_gene_17134|Tiso_gene_1843}}
+
{{#set: in pathway=ORN-AMINOPENTANOATE-CAT-PWY|ARG-GLU-PWY}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:32, 21 March 2018

Pathway TREHALOSESYN-PWY

  • taxonomic range:
  • common name:
    • trehalose biosynthesis III
  • Synonym(s):

Reaction(s) found

1 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links