Difference between revisions of "TREHALOSESYN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-CYCLODEAMINASE-RXN ORNITHINE-CYCLODEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSESYN-PWY TREHALOSESYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-CYCLODEAMINASE-RXN ORNITHINE-CYCLODEAMINASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSESYN-PWY TREHALOSESYN-PWY] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
 
* common name:
 
* common name:
** ornithine_cyclodeaminase
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** trehalose biosynthesis III
* ec number:
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** [http://enzyme.expasy.org/EC/4.3.1.12 EC-4.3.1.12]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''1''' reactions found over '''2''' reactions in the full pathway
** 1 [[L-ORNITHINE]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[AMMONIUM]][c]
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* [[TREHALOSEPHOSPHA-RXN]]
* With common name(s):
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** 3 associated gene(s):
** 1 L-ornithine[c] '''=>''' 1 L-proline[c] '''+''' 1 ammonium[c]
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*** [[Tiso_gene_10840]]
 
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*** [[Tiso_gene_18196]]
== Genes associated with this reaction  ==
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*** [[Tiso_gene_14220]]
Genes have been associated with this reaction based on different elements listed below.
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** 3 reconstruction source(s) associated:
* [[Tiso_gene_17134]]
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*** [[orthology-athaliana]]
** IN-SILICO_ANNOTATION
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*** [[annotation-in-silico_annotation]]
***AUTOMATED-NAME-MATCH
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*** [[orthology-esiliculosus]]
** [[pantograph]]-[[esiliculosus]]
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== Reaction(s) not found ==
* [[Tiso_gene_1843]]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.36-RXN 2.4.1.36-RXN]
** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[ORN-AMINOPENTANOATE-CAT-PWY]], L-ornithine degradation I (L-proline biosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=ORN-AMINOPENTANOATE-CAT-PWY ORN-AMINOPENTANOATE-CAT-PWY]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[ARG-GLU-PWY]], L-arginine degradation VII (arginase 3 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-GLU-PWY ARG-GLU-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-201174}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24368 24368]
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{{#set: common name=trehalose biosynthesis III}}
* LIGAND-RXN:
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{{#set: reaction found=1}}
** [http://www.genome.jp/dbget-bin/www_bget?R00671 R00671]
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{{#set: total reaction=2}}
* UNIPROT:
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{{#set: completion rate=50.0}}
** [http://www.uniprot.org/uniprot/Q59701 Q59701]
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** [http://www.uniprot.org/uniprot/P09773 P09773]
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** [http://www.uniprot.org/uniprot/P33728 P33728]
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** [http://www.uniprot.org/uniprot/O68052 O68052]
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** [http://www.uniprot.org/uniprot/Q9WWA2 Q9WWA2]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ornithine_cyclodeaminase}}
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{{#set: ec number=EC-4.3.1.12}}
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{{#set: gene associated=Tiso_gene_17134|Tiso_gene_1843}}
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{{#set: in pathway=ORN-AMINOPENTANOATE-CAT-PWY|ARG-GLU-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:32, 21 March 2018

Pathway TREHALOSESYN-PWY

  • taxonomic range:
  • common name:
    • trehalose biosynthesis III
  • Synonym(s):

Reaction(s) found

1 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links