Difference between revisions of "AAL fum"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDP-ARABINOSE-4-EPIMERASE-RXN UDP-ARABINOSE-4-EPIMERASE-RXN] == * direction: ** REVERSIBLE * common...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AAL_fum AAL_fum] == * direction: ** LEFT-TO-RIGHT * common name: ** N6-(1,2-dicarboxyethyl)AMP AMP-...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDP-ARABINOSE-4-EPIMERASE-RXN UDP-ARABINOSE-4-EPIMERASE-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AAL_fum AAL_fum] ==
 
* direction:
 
* direction:
** REVERSIBLE
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** udp-galactopyranose_mutase
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** N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming)
* ec number:
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** [http://enzyme.expasy.org/EC/5.1.3.5 EC-5.1.3.5]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CPD-12513]][c] '''<=>''' 1 [[UDP-D-XYLOSE]][c]
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** 1.0 [[ADENYLOSUCC]][c] '''=>''' 1.0 [[AMP]][c] '''+''' 1.0 [[FUM]][c]
 
* With common name(s):
 
* With common name(s):
** 1 UDP-&beta;-L-arabinopyranose[c] '''<=>''' 1 UDP-&alpha;-D-xylose[c]
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** 1.0 adenylo-succinate[c] '''=>''' 1.0 AMP[c] '''+''' 1.0 fumarate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_15395]]
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* Gene: [[Tiso_gene_6720]]
** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
 
== Pathways  ==
* [[PWY-63]], UDP-L-arabinose biosynthesis I (from UDP-xylose): [http://metacyc.org/META/NEW-IMAGE?object=PWY-63 PWY-63]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[annotation]]
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* Category: [[orthology]]
** Source: [[annotation-experimental_annotation]]
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** Source: [[orthology-creinhardtii]]
*** Tool: [[pathwaytools]]
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*** Tool: [[pantograph]]
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: direction=LEFT-TO-RIGHT}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11320 11320]
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{{#set: common name=N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming)}}
* LIGAND-RXN:
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{{#set: gene associated=Tiso_gene_6720}}
** [http://www.genome.jp/dbget-bin/www_bget?R01473 R01473]
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{{#set: in pathway=}}
{{#set: direction=REVERSIBLE}}
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{{#set: reconstruction category=orthology}}
{{#set: common name=udp-galactopyranose_mutase}}
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{{#set: reconstruction source=orthology-creinhardtii}}
{{#set: ec number=EC-5.1.3.5}}
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{{#set: reconstruction tool=pantograph}}
{{#set: gene associated=Tiso_gene_15395}}
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{{#set: in pathway=PWY-63}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:25, 21 March 2018

Reaction AAL_fum

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 adenylo-succinate[c] => 1.0 AMP[c] + 1.0 fumarate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links