Difference between revisions of "1.14.19.3-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17799 RXN-17799] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-ketoacyl-_thiolase ** ace...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.19.3-RXN 1.14.19.3-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17799 RXN-17799] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.19.3-RXN 1.14.19.3-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 3-ketoacyl-_thiolase
 
−
** acetyl-_c-acetyltransferase
 
−
** thiolase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/1.14.19.3 EC-1.14.19.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CO-A]][c] '''+''' 1 [[CPD-19153]][c] '''=>''' 1 [[CPD-14925]][c] '''+''' 1 [[ACETYL-COA]][c]
+
** 2 [[PROTON]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-18]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[GAMMA-LINOLENOYL-COA]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 coenzyme A[c] '''+''' 1 3-oxo-(5Z)-dodecenoyl-CoA[c] '''=>''' 1 3-cis-decenoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
+
** 2 H+[c] '''+''' 2 a ferrocytochrome b5[c] '''+''' 1 oxygen[c] '''+''' 1 linoleoyl-CoA[c] '''=>''' 2 H2O[c] '''+''' 1 γ-linolenoyl-CoA[c] '''+''' 2 a ferricytochrome b5[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3855]]
+
* Gene: [[Tiso_gene_2508]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17451]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10116]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_15327]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_3856]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6000]], γ-linolenate biosynthesis II (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6000 PWY-6000]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-esiliculosus]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22196 22196]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03814 R03814]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9HDG8 Q9HDG8]
 +
** [http://www.uniprot.org/uniprot/Q54795 Q54795]
 +
** [http://www.uniprot.org/uniprot/O95864 O95864]
 +
** [http://www.uniprot.org/uniprot/O61388 O61388]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-ketoacyl-_thiolase}}
+
{{#set: ec number=EC-1.14.19.3}}
−
{{#set: common name=acetyl-_c-acetyltransferase}}
+
{{#set: gene associated=Tiso_gene_2508}}
−
{{#set: common name=thiolase}}
+
{{#set: in pathway=PWY-6000}}
−
{{#set: ec number=EC-2.3.1.16}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: gene associated=Tiso_gene_3855|Tiso_gene_17451|Tiso_gene_10116|Tiso_gene_15327|Tiso_gene_3856}}
+
{{#set: reconstruction source=orthology-esiliculosus}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:25, 21 March 2018

Reaction 1.14.19.3-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6000, γ-linolenate biosynthesis II (animals): PWY-6000
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




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