Difference between revisions of "AMPSYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.1.2.20-RXN 4.1.2.20-RXN] == * direction: ** REVERSIBLE * common name: ** 2-dehydro-3-deoxyglucara...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMPSYN-RXN AMPSYN-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/4...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.1.2.20-RXN 4.1.2.20-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMPSYN-RXN AMPSYN-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
* common name:
 
** 2-dehydro-3-deoxyglucarate_aldolase
 
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/4.1.2.20 EC-4.1.2.20]
+
** [http://enzyme.expasy.org/EC/4.3.2.2 EC-4.3.2.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[2-KETO-3-DEOXY-D-GLUCARATE]][c] '''<=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[TARTRONATE-S-ALD]][c]
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** 1 [[ADENYLOSUCC]][c] '''<=>''' 1 [[FUM]][c] '''+''' 1 [[AMP]][c]
 
* With common name(s):
 
* With common name(s):
** 1 (2S,3S)-2,3-dihydroxy-5-oxohexanedioate[c] '''<=>''' 1 pyruvate[c] '''+''' 1 tartronate semialdehyde[c]
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** 1 adenylo-succinate[c] '''<=>''' 1 fumarate[c] '''+''' 1 AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Tiso_gene_16237]]
 
** IN-SILICO_ANNOTATION
 
***AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10268 10268]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16853 16853]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R03277 R03277]
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** [http://www.genome.jp/dbget-bin/www_bget?R01083 R01083]
 +
* UNIPROT:
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** [http://www.uniprot.org/uniprot/P21265 P21265]
 +
** [http://www.uniprot.org/uniprot/Q58339 Q58339]
 +
** [http://www.uniprot.org/uniprot/Q9CF40 Q9CF40]
 +
** [http://www.uniprot.org/uniprot/Q9PJ88 Q9PJ88]
 +
** [http://www.uniprot.org/uniprot/Q9JSP3 Q9JSP3]
 +
** [http://www.uniprot.org/uniprot/P0AB89 P0AB89]
 +
** [http://www.uniprot.org/uniprot/O65180 O65180]
 +
** [http://www.uniprot.org/uniprot/P12047 P12047]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
{{#set: common name=2-dehydro-3-deoxyglucarate_aldolase}}
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{{#set: ec number=EC-4.3.2.2}}
{{#set: ec number=EC-4.1.2.20}}
+
{{#set: in pathway=PWY-7219}}
{{#set: gene associated=Tiso_gene_16237}}
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{{#set: reconstruction category=manual|annotation}}
{{#set: in pathway=}}
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{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:25, 21 March 2018

Reaction AMPSYN-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 adenylo-succinate[c] <=> 1 fumarate[c] + 1 AMP[c]

Genes associated with this reaction

Pathways

  • PWY-7219, adenosine ribonucleotides de novo biosynthesis: PWY-7219
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links