Difference between revisions of "CHD-RXN"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=16S-rRNA-adenine1518-adenine1519 16S-rRNA-adenine1518-adenine1519] == * common name: ** adenine...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] == * direction: ** REVERSIBLE * common name: ** glucose-methanol-choline_oxidoredu...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] == |
| + | * direction: | ||
| + | ** REVERSIBLE | ||
* common name: | * common name: | ||
| − | ** | + | ** glucose-methanol-choline_oxidoreductase |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/1.1.99.1 EC-1.1.99.1] | ||
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | == | + | ** 1 [[Acceptor]][c] '''+''' 1 [[CHOLINE]][c] '''<=>''' 1 [[BETAINE_ALDEHYDE]][c] '''+''' 1 [[Donor-H2]][c] |
| − | = | + | * With common name(s): |
| + | ** 1 an oxidized electron acceptor[c] '''+''' 1 choline[c] '''<=>''' 1 betaine aldehyde[c] '''+''' 1 a reduced electron acceptor[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_16765]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[CHOLINE-BETAINE-ANA-PWY]], choline degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-BETAINE-ANA-PWY CHOLINE-BETAINE-ANA-PWY] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[BETSYN-PWY]], glycine betaine biosynthesis I (Gram-negative bacteria): [http://metacyc.org/META/NEW-IMAGE?object=BETSYN-PWY BETSYN-PWY] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: common name= | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17433 17433] |
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R01025 R01025] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/P17444 P17444] | ||
| + | {{#set: direction=REVERSIBLE}} | ||
| + | {{#set: common name=glucose-methanol-choline_oxidoreductase}} | ||
| + | {{#set: ec number=EC-1.1.99.1}} | ||
| + | {{#set: gene associated=Tiso_gene_16765}} | ||
| + | {{#set: in pathway=CHOLINE-BETAINE-ANA-PWY|BETSYN-PWY}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 19:32, 21 March 2018
Contents
Reaction CHD-RXN
- direction:
- REVERSIBLE
- common name:
- glucose-methanol-choline_oxidoreductase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 Acceptor[c] + 1 CHOLINE[c] <=> 1 BETAINE_ALDEHYDE[c] + 1 Donor-H2[c]
- With common name(s):
- 1 an oxidized electron acceptor[c] + 1 choline[c] <=> 1 betaine aldehyde[c] + 1 a reduced electron acceptor[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_16765
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- CHOLINE-BETAINE-ANA-PWY, choline degradation I: CHOLINE-BETAINE-ANA-PWY
- 2 reactions found over 2 reactions in the full pathway
- BETSYN-PWY, glycine betaine biosynthesis I (Gram-negative bacteria): BETSYN-PWY
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
