Difference between revisions of "NAG1P-URIDYLTRANS-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOKINASE-RXN PHOSPHORIBULOKINASE-RXN] == * direction: ** REVERSIBLE * common name: ** ph...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAG1P-URIDYLTRANS-RXN NAG1P-URIDYLTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dp-...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOKINASE-RXN PHOSPHORIBULOKINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAG1P-URIDYLTRANS-RXN NAG1P-URIDYLTRANS-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** phosphoribulokinase
+
** dp-n-acetylglucosamine_pyrophosphorylase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.19 EC-2.7.1.19]
+
** [http://enzyme.expasy.org/EC/2.7.7.23 EC-2.7.7.23]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[RIBULOSE-5P]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[D-RIBULOSE-15-P2]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[N-ACETYL-D-GLUCOSAMINE-1-P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UTP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 D-ribulose 5-phosphate[c] '''+''' 1 ATP[c] '''<=>''' 1 ADP[c] '''+''' 1 D-ribulose-1,5-bisphosphate[c] '''+''' 1 H+[c]
+
** 1 N-acetyl-&alpha;-D-glucosamine 1-phosphate[c] '''+''' 1 H+[c] '''+''' 1 UTP[c] '''=>''' 1 diphosphate[c] '''+''' 1 UDP-N-acetyl-&alpha;-D-glucosamine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_17637]]
+
* Gene: [[Tiso_gene_6457]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
* Gene: [[Tiso_gene_19372]]
−
***EC-NUMBER
+
** Source: [[orthology-athaliana]]
−
** [[pantograph]]-[[athaliana]]
+
* Gene: [[Tiso_gene_6459]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[synechocystis]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_6458]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
+
* [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5514 PWY-5514]
−
** '''13''' reactions found over '''13''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
+
* [[UDPNACETYLGALSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLGALSYN-PWY UDPNACETYLGALSYN-PWY]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-1261]], anhydromuropeptides recycling: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1261 PWY0-1261]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[UDPNAGSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=UDPNAGSYN-PWY UDPNAGSYN-PWY]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
** Source: [[orthology-creinhardtii]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19365 19365]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13509 13509]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01523 R01523]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00416 R00416]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P23010 P23010]
+
** [http://www.uniprot.org/uniprot/Q9PPA2 Q9PPA2]
−
** [http://www.uniprot.org/uniprot/P0AEX5 P0AEX5]
+
** [http://www.uniprot.org/uniprot/Q9JWN3 Q9JWN3]
−
** [http://www.uniprot.org/uniprot/P19923 P19923]
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/P19924 P19924]
+
{{#set: common name=dp-n-acetylglucosamine_pyrophosphorylase}}
−
** [http://www.uniprot.org/uniprot/P23015 P23015]
+
{{#set: ec number=EC-2.7.7.23}}
−
** [http://www.uniprot.org/uniprot/P12033 P12033]
+
{{#set: gene associated=Tiso_gene_6457|Tiso_gene_19372|Tiso_gene_6459|Tiso_gene_6458}}
−
** [http://www.uniprot.org/uniprot/Q8GRU9 Q8GRU9]
+
{{#set: in pathway=PWY-5514|UDPNACETYLGALSYN-PWY|PWY0-1261|UDPNAGSYN-PWY}}
−
** [http://www.uniprot.org/uniprot/P09559 P09559]
+
{{#set: reconstruction category=orthology|annotation}}
−
** [http://www.uniprot.org/uniprot/P25697 P25697]
+
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation}}
−
** [http://www.uniprot.org/uniprot/P93681 P93681]
+
−
** [http://www.uniprot.org/uniprot/P19824 P19824]
+
−
** [http://www.uniprot.org/uniprot/P27774 P27774]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=phosphoribulokinase}}
+
−
{{#set: ec number=EC-2.7.1.19}}
+
−
{{#set: gene associated=Tiso_gene_17637}}
+
−
{{#set: in pathway=CALVIN-PWY|PWY-5723}}
+
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
+
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:25, 21 March 2018

Reaction NAG1P-URIDYLTRANS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dp-n-acetylglucosamine_pyrophosphorylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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