Difference between revisions of "PWY-7574"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISPH2-RXN ISPH2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7574 PWY-7574] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] **...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISPH2-RXN ISPH2-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7574 PWY-7574] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
−
** ORF
+
** propanoyl-CoA degradation II
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.17.7.4 EC-1.17.7.4]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** propionyl-CoA degradation II
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''3''' reactions found over '''5''' reactions in the full pathway
−
** 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c] '''=>''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[WATER]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
+
* [[RXN-2902]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate[c] '''=>''' 1 isopentenyl diphosphate[c] '''+''' 1 H2O[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c]
+
*** [[Tiso_gene_11323]]
−
 
+
** 1 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[annotation-in-silico_annotation]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[RXN-6383]]
−
* [[Tiso_gene_5609]]
+
** 3 associated gene(s):
−
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_5857]]
−
***EC-NUMBER
+
*** [[Tiso_gene_16703]]
−
** EXPERIMENTAL_ANNOTATION
+
*** [[Tiso_gene_14257]]
−
***EC-NUMBER
+
** 3 reconstruction source(s) associated:
−
** [[pantograph]]-[[athaliana]]
+
*** [[orthology-athaliana]]
−
** [[pantograph]]-[[synechocystis]]
+
*** [[orthology-creinhardtii]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[orthology-esiliculosus]]
−
== Pathways  ==
+
* [[RXN-6384]]
−
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
+
** 1 associated gene(s):
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
*** [[Tiso_gene_2224]]
−
* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
+
** 2 reconstruction source(s) associated:
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
*** [[annotation-experimental_annotation]]
−
== Reconstruction information  ==
+
*** [[annotation-in-silico_annotation]]
−
* [[orthology]]:
+
== Reaction(s) not found ==
−
** [[pantograph]]:
+
* [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYPROPIONATE-DEHYDROGENASE-RXN 3-HYDROXYPROPIONATE-DEHYDROGENASE-RXN]
−
*** [[synechocystis]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15977 RXN-15977]
−
*** [[esiliculosus]]
+
−
*** [[athaliana]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-2}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R08209 R08209]
+
{{#set: taxonomic range=TAX-33208}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R05884 R05884]
+
{{#set: taxonomic range=TAX-4751}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-33090}}
−
{{#set: common name=ORF}}
+
{{#set: common name=propanoyl-CoA degradation II}}
−
{{#set: ec number=EC-1.17.7.4}}
+
{{#set: common name=propionyl-CoA degradation II}}
−
{{#set: gene associated=Tiso_gene_5609}}
+
{{#set: reaction found=3}}
−
{{#set: in pathway=NONMEVIPP-PWY|PWY-7560}}
+
{{#set: total reaction=5}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: completion rate=60.0}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=synechocystis|esiliculosus|athaliana}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 19:32, 21 March 2018

Pathway PWY-7574

Reaction(s) found

3 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7574&oldid=42229"