Difference between revisions of "RXN-13308"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ARGSYN-PWY ARGSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TA...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13308 RXN-13308] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
Line 1: Line 1:
[[Category:Pathway]]
+
[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ARGSYN-PWY ARGSYN-PWY] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13308 RXN-13308] ==
* taxonomic range:
+
* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
+
** LEFT-TO-RIGHT
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
+
* ec number:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** [http://enzyme.expasy.org/EC/1.3.1.93 EC-1.3.1.93]
* common name:
+
** L-arginine biosynthesis I (via L-ornithine)
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
+
== Reaction Formula ==
'''5''' reactions found over '''6''' reactions in the full pathway
+
* With identifiers:
* [[ARGSUCCINLYA-RXN]]
+
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-14282]][c] '''=>''' 1 [[CPD-10280]][c] '''+''' 1 [[NADP]][c]
** 1 associated gene(s):
+
* With common name(s):
*** [[Tiso_gene_2485]]
+
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 trans-lignocer-2-enoyl-CoA[c] '''=>''' 1 lignoceroyl-CoA[c] '''+''' 1 NADP+[c]
** 7 reconstruction source(s) associated:
+
 
*** [[annotation-experimental_annotation]]
+
== Genes associated with this reaction  ==
*** [[orthology-esiliculosus]]
+
== Pathways  ==
*** [[annotation-in-silico_annotation]]
+
* [[PWY-7036]], very long chain fatty acid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036]
*** [[orthology-athaliana]]
+
** '''16''' reactions found over '''16''' reactions in the full pathway
*** [[orthology-synechocystis]]
+
== Reconstruction information  ==
*** [[manual-primary_network]]
+
* Category: [[annotation]]
*** [[orthology-creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
* [[ARGSUCCINSYN-RXN]]
+
*** Tool: [[pathwaytools]]
** 1 associated gene(s):
+
** Source: [[annotation-experimental_annotation]]
*** [[Tiso_gene_12592]]
+
*** Tool: [[pathwaytools]]
** 7 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
+
*** [[orthology-esiliculosus]]
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-athaliana]]
+
*** [[orthology-synechocystis]]
+
*** [[manual-primary_network]]
+
*** [[orthology-creinhardtii]]
+
* [[CARBPSYN-RXN]]
+
** 3 associated gene(s):
+
*** [[Tiso_gene_4976]]
+
*** [[Tiso_gene_4975]]
+
*** [[Tiso_gene_4685]]
+
** 4 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
*** [[manual-primary_network]]
+
*** [[annotation-experimental_annotation]]
+
*** [[orthology-esiliculosus]]
+
* [[GLUTORN-PWY]]
+
** 0 associated gene:
+
* [[ORNCARBAMTRANSFER-RXN]]
+
** 1 associated gene(s):
+
*** [[Tiso_gene_18444]]
+
** 7 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
+
*** [[orthology-esiliculosus]]
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-athaliana]]
+
*** [[orthology-synechocystis]]
+
*** [[manual-primary_network]]
+
*** [[orthology-creinhardtii]]
+
== Reaction(s) not found ==
+
 
== External links  ==
 
== External links  ==
* ECOCYC:
+
{{#set: direction=LEFT-TO-RIGHT}}
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=ARGSYN-PWY ARGSYN-PWY]
+
{{#set: ec number=EC-1.3.1.93}}
{{#set: taxonomic range=TAX-2157}}
+
{{#set: in pathway=PWY-7036}}
{{#set: taxonomic range=TAX-33090}}
+
{{#set: reconstruction category=annotation}}
{{#set: taxonomic range=TAX-2}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
{{#set: common name=L-arginine biosynthesis I (via L-ornithine)}}
+
{{#set: reconstruction tool=pathwaytools}}
{{#set: reaction found=5}}
+
{{#set: total reaction=6}}
+
{{#set: completion rate=83.0}}
+

Latest revision as of 19:04, 21 March 2018

Reaction RXN-13308

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADPH[c] + 1 H+[c] + 1 trans-lignocer-2-enoyl-CoA[c] => 1 lignoceroyl-CoA[c] + 1 NADP+[c]

Genes associated with this reaction

Pathways

  • PWY-7036, very long chain fatty acid biosynthesis II: PWY-7036
    • 16 reactions found over 16 reactions in the full pathway

Reconstruction information

External links