Difference between revisions of "Tiso gene 16913"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-171 RXN-171] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.14...")
(Created page with "Category:Gene == Gene Tiso_gene_16913 == * right end position: ** 2427 * transcription direction: ** POSITIVE * left end position: ** 12 * centisome position: ** 0.2968827...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-171 RXN-171] ==
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== Gene Tiso_gene_16913 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2427
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
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** POSITIVE
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* left end position:
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** 12
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* centisome position:
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** 0.29688272   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-15556]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD1F-134]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CPD-482]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 oxygen[c] '''+''' 1 gibberellin A9[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 CO2[c] '''+''' 1 succinate[c] '''+''' 1 gibberellin A51[c]
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* Reaction: [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* Gene: [[Tiso_gene_3330]]
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* [[PWY-7511]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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* [[PWY-102]], gibberellin inactivation I (2β-hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-102 PWY-102]
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** '''4''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=2427}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06337 R06337]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=12}}
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{{#set: ec number=EC-1.14.11}}
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{{#set: centisome position=0.29688272    }}
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{{#set: gene associated=Tiso_gene_3330}}
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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{{#set: in pathway=PWY-102}}
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{{#set: pathway associated=PWY-7511}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:06, 21 March 2018

Gene Tiso_gene_16913

  • right end position:
    • 2427
  • transcription direction:
    • POSITIVE
  • left end position:
    • 12
  • centisome position:
    • 0.29688272
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_16913&oldid=39458"