Difference between revisions of "PWY-7376"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.4-RXN 1.3.7.4-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7376 PWY-7376] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] **...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.4-RXN 1.3.7.4-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7376 PWY-7376] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
−
* ec number:
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
−
** [http://enzyme.expasy.org/EC/1.3.7.4 EC-1.3.7.4]
+
* common name:
 +
** cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation)
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''2''' reactions found over '''13''' reactions in the full pathway
−
** 1 [[BILIVERDINE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[3Z-PHYTOCHROMOBILIN]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
+
* [[RXN-8675]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 biliverdin-IX-α[c] '''+''' 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''=>''' 1 (3Z)-phytochromobilin[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c]
+
*** [[Tiso_gene_8614]]
−
 
+
** 1 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[orthology-esiliculosus]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[UROPORIIIMETHYLTRANSA-RXN]]
−
* Gene: [[Tiso_gene_17350]]
+
** 1 associated gene(s):
−
** Source: [[orthology-athaliana]]
+
*** [[Tiso_gene_8614]]
−
** Source: [[orthology-esiliculosus]]
+
** 1 reconstruction source(s) associated:
−
== Pathways  ==
+
*** [[orthology-esiliculosus]]
−
* [[PWY-7170]], phytochromobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7170 PWY-7170]
+
== Reaction(s) not found ==
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
* [http://metacyc.org/META/NEW-IMAGE?object=1.3.1.54-RXN 1.3.1.54-RXN]
−
== Reconstruction information  ==
+
* [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.130-RXN 2.1.1.130-RXN]
−
* Category: [[orthology]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.131-RXN 2.1.1.131-RXN]
−
** Source: [[orthology-athaliana]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.133-RXN 2.1.1.133-RXN]
−
*** Tool: [[pantograph]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=5.4.1.2-RXN 5.4.1.2-RXN]
−
** Source: [[orthology-esiliculosus]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=R321-RXN R321-RXN]
−
*** Tool: [[pantograph]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=R322-RXN R322-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=R341-RXN R341-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=R342-RXN R342-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13824 RXN-13824]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13826 RXN-13826]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-2}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03678 R03678]
+
{{#set: taxonomic range=TAX-2157}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation)}}
−
{{#set: ec number=EC-1.3.7.4}}
+
{{#set: reaction found=2}}
−
{{#set: gene associated=Tiso_gene_17350}}
+
{{#set: total reaction=13}}
−
{{#set: in pathway=PWY-7170}}
+
{{#set: completion rate=15.0}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 19:07, 21 March 2018

Pathway PWY-7376

  • taxonomic range:
  • common name:
    • cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation)
  • Synonym(s):

Reaction(s) found

2 reactions found over 13 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7376&oldid=39612"