Difference between revisions of "GLYSYN-ALA-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BIOTINLIG-RXN BIOTINLIG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: **...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLYSYN-ALA-PWY GLYSYN-ALA-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX...")
 
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BIOTINLIG-RXN BIOTINLIG-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLYSYN-ALA-PWY GLYSYN-ALA-PWY] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
** ORF
+
** glycine biosynthesis III
* ec number:
+
** [http://enzyme.expasy.org/EC/6.3.4.15 EC-6.3.4.15]
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''1''' reactions found over '''1''' reactions in the full pathway
** 1 [[BCCP-monomers]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[BIOTIN]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[BCCP-biotin-monomers]][c]
+
* [[ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN]]
* With common name(s):
+
** 3 associated gene(s):
** 1 a [biotin-carboxyl-carrier protein monomer][c] '''+''' 1 ATP[c] '''+''' 1 biotin[c] '''=>''' 1 AMP[c] '''+''' 1 H+[c] '''+''' 1 diphosphate[c] '''+''' 1 a biotinylated [BCCP monomer][c]
+
*** [[Tiso_gene_6134]]
 
+
*** [[Tiso_gene_5726]]
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_11231]]
Genes have been associated with this reaction based on different elements listed below.
+
** 5 reconstruction source(s) associated:
* Gene: [[Tiso_gene_14184]]
+
*** [[annotation-experimental_annotation]]
** Source: [[annotation-in-silico_annotation]]
+
*** [[orthology-athaliana]]
*** Assignment: EC-NUMBER
+
*** [[annotation-in-silico_annotation]]
* Gene: [[Tiso_gene_8713]]
+
*** [[manual-primary_network]]
** Source: [[orthology-esiliculosus]]
+
*** [[orthology-esiliculosus]]
* Gene: [[Tiso_gene_17216]]
+
== Reaction(s) not found ==
** Source: [[orthology-esiliculosus]]
+
== Pathways  ==
+
* [[PWY0-1264]], biotin-carboxyl carrier protein assembly: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1264 PWY0-1264]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
+
== Reconstruction information  ==
+
* Category: [[orthology]]
+
** Source: [[orthology-esiliculosus]]
+
*** Tool: [[pantograph]]
+
* Category: [[annotation]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
* UNIPROT:
+
{{#set: taxonomic range=TAX-2}}
** [http://www.uniprot.org/uniprot/P06709 P06709]
+
{{#set: taxonomic range=TAX-2157}}
** [http://www.uniprot.org/uniprot/Q9PJ27 Q9PJ27]
+
{{#set: taxonomic range=TAX-2759}}
** [http://www.uniprot.org/uniprot/Q9CEQ6 Q9CEQ6]
+
{{#set: common name=glycine biosynthesis III}}
** [http://www.uniprot.org/uniprot/Q9CED9 Q9CED9]
+
{{#set: reaction found=1}}
** [http://www.uniprot.org/uniprot/Q9JWI7 Q9JWI7]
+
{{#set: total reaction=1}}
** [http://www.uniprot.org/uniprot/P48445 P48445]
+
{{#set: completion rate=100.0}}
** [http://www.uniprot.org/uniprot/P72816 P72816]
+
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=ORF}}
+
{{#set: ec number=EC-6.3.4.15}}
+
{{#set: gene associated=Tiso_gene_14184|Tiso_gene_8713|Tiso_gene_17216}}
+
{{#set: in pathway=PWY0-1264}}
+
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:07, 21 March 2018

Pathway GLYSYN-ALA-PWY

Reaction(s) found

1 reactions found over 1 reactions in the full pathway

Reaction(s) not found

External links