Difference between revisions of "HOMOGENTISATE-12-DIOXYGENASE-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_3445 == * right end position: ** 11515 * transcription direction: ** NEGATIVE * left end position: ** 9078 * centisome position: ** 54.4277...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOGENTISATE-12-DIOXYGENASE-RXN HOMOGENTISATE-12-DIOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_3445 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOGENTISATE-12-DIOXYGENASE-RXN HOMOGENTISATE-12-DIOXYGENASE-RXN] ==
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* right end position:
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* direction:
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** 11515
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** homogentisate_-dioxygenase
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* left end position:
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* ec number:
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** 9078
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** [http://enzyme.expasy.org/EC/1.13.11.5 EC-1.13.11.5]
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* centisome position:
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** 54.427727   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[3-DEHYDROQUINATE-SYNTHASE-RXN]]
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* With identifiers:
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[HOMOGENTISATE]][c] '''=>''' 1 [[4-MALEYL-ACETOACETATE]][c] '''+''' 1 [[PROTON]][c]
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* With common name(s):
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** 1 oxygen[c] '''+''' 1 homogentisate[c] '''=>''' 1 4-maleyl-acetoacetate[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_20095]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[TYRFUMCAT-PWY]], L-tyrosine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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* [[PWY-6164]]
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== External links  ==
 
== External links  ==
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{{#set: right end position=11515}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15449 15449]
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{{#set: left end position=9078}}
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* LIGAND-RXN:
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{{#set: centisome position=54.427727    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R02519 R02519]
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{{#set: reaction associated=3-DEHYDROQUINATE-SYNTHASE-RXN}}
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* UNIPROT:
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{{#set: pathway associated=PWY-6164}}
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** [http://www.uniprot.org/uniprot/Q9Y041 Q9Y041]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=homogentisate_-dioxygenase}}
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{{#set: ec number=EC-1.13.11.5}}
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{{#set: gene associated=Tiso_gene_20095}}
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{{#set: in pathway=TYRFUMCAT-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:07, 21 March 2018

Reaction HOMOGENTISATE-12-DIOXYGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • homogentisate_-dioxygenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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