Difference between revisions of "1.1.3.37-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPSYN-RXN PRPPSYN-RXN] == * direction: ** REVERSIBLE * common name: ** ORF * ec number: ** [http:...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.3.37-RXN 1.1.3.37-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** xylitol_oxidas...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPSYN-RXN PRPPSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.3.37-RXN 1.1.3.37-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
 
** ORF
 
** ORF
 +
** xylitol_oxidase
 +
** mitochondrial_l-galactono-_-lactone_dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.6.1 EC-2.7.6.1]
+
** [http://enzyme.expasy.org/EC/1.1.3.37 EC-1.1.3.37]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[RIBOSE-5P]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[PRPP]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-356]][c] '''=>''' 1 [[CPD-1789]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 D-ribose 5-phosphate[c] '''<=>''' 1 H+[c] '''+''' 1 5-phospho-&alpha;-D-ribose 1-diphosphate[c] '''+''' 1 AMP[c]
+
** 1 oxygen[c] '''+''' 1 D-arabinono-1,4-lactone[c] '''=>''' 1 dehydro-D-arabinono-1,4-lactone[c] '''+''' 1 hydrogen peroxide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_4677]]
+
* Gene: [[Tiso_gene_210]]
−
** Source: [[annotation-experimental_annotation]]
+
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-athaliana]]
+
* Gene: [[Tiso_gene_14187]]
−
** Source: [[orthology-synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
−
** Source: [[orthology-esiliculosus]]
+
*** Assignment: EC-NUMBER
−
* Gene: [[Tiso_gene_3025]]
+
* Gene: [[Tiso_gene_6787]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-662]], PRPP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-662 PWY0-662]
+
* [[PWY3O-6]], dehydro-D-arabinono-1,4-lactone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-6 PWY3O-6]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15609 15609]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23756 23756]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01049 R01049]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02715 R02715]
−
* UNIPROT:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/Q63468 Q63468]
+
−
** [http://www.uniprot.org/uniprot/Q9CEI4 Q9CEI4]
+
−
** [http://www.uniprot.org/uniprot/O67556 O67556]
+
−
** [http://www.uniprot.org/uniprot/P44328 P44328]
+
−
** [http://www.uniprot.org/uniprot/Q9PP15 Q9PP15]
+
−
** [http://www.uniprot.org/uniprot/P56184 P56184]
+
−
** [http://www.uniprot.org/uniprot/P65235 P65235]
+
−
** [http://www.uniprot.org/uniprot/Q9CHB8 Q9CHB8]
+
−
** [http://www.uniprot.org/uniprot/P42816 P42816]
+
−
** [http://www.uniprot.org/uniprot/Q59988 Q59988]
+
−
** [http://www.uniprot.org/uniprot/P14193 P14193]
+
−
** [http://www.uniprot.org/uniprot/P0A1V6 P0A1V6]
+
−
** [http://www.uniprot.org/uniprot/P0A717 P0A717]
+
−
** [http://www.uniprot.org/uniprot/P60891 P60891]
+
−
** [http://www.uniprot.org/uniprot/P11908 P11908]
+
−
** [http://www.uniprot.org/uniprot/P21108 P21108]
+
−
** [http://www.uniprot.org/uniprot/P60892 P60892]
+
−
** [http://www.uniprot.org/uniprot/P09330 P09330]
+
−
** [http://www.uniprot.org/uniprot/P32895 P32895]
+
−
** [http://www.uniprot.org/uniprot/Q59489 Q59489]
+
−
** [http://www.uniprot.org/uniprot/P38620 P38620]
+
−
** [http://www.uniprot.org/uniprot/P38063 P38063]
+
−
** [http://www.uniprot.org/uniprot/P38689 P38689]
+
−
** [http://www.uniprot.org/uniprot/Q42581 Q42581]
+
−
** [http://www.uniprot.org/uniprot/P41831 P41831]
+
−
** [http://www.uniprot.org/uniprot/P46585 P46585]
+
−
** [http://www.uniprot.org/uniprot/Q42583 Q42583]
+
−
** [http://www.uniprot.org/uniprot/Q14558 Q14558]
+
−
** [http://www.uniprot.org/uniprot/Q55848 Q55848]
+
−
** [http://www.uniprot.org/uniprot/Q49042 Q49042]
+
−
** [http://www.uniprot.org/uniprot/O64888 O64888]
+
−
** [http://www.uniprot.org/uniprot/Q680A5 Q680A5]
+
−
** [http://www.uniprot.org/uniprot/Q93Z66 Q93Z66]
+
−
{{#set: direction=REVERSIBLE}}
+
 
{{#set: common name=ORF}}
 
{{#set: common name=ORF}}
−
{{#set: ec number=EC-2.7.6.1}}
+
{{#set: common name=xylitol_oxidase}}
−
{{#set: gene associated=Tiso_gene_4677|Tiso_gene_3025}}
+
{{#set: common name=mitochondrial_l-galactono-_-lactone_dehydrogenase}}
−
{{#set: in pathway=PWY0-662}}
+
{{#set: ec number=EC-1.1.3.37}}
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
{{#set: gene associated=Tiso_gene_210|Tiso_gene_14187|Tiso_gene_6787}}
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network}}
+
{{#set: in pathway=PWY3O-6}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:08, 21 March 2018

Reaction 1.1.3.37-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • xylitol_oxidase
    • mitochondrial_l-galactono-_-lactone_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY3O-6, dehydro-D-arabinono-1,4-lactone biosynthesis: PWY3O-6
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links






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