Difference between revisions of "RXN66-482"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-482 RXN66-482] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-482 RXN66-482] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** LEFT-TO-RIGHT
* common name:
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* ec number:
** serotonin degradation
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** [http://enzyme.expasy.org/EC/1.3.1.38 EC-1.3.1.38]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''6''' reactions found over '''7''' reactions in the full pathway
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* With identifiers:
* [[RXN-10777]]
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** 1 [[CPD-14928]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-206]][c]
** 1 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_5505]]
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** 1 phytenoyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 phytanoyl-CoA[c]
** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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== Genes associated with this reaction  ==
* [[RXN-10779]]
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Genes have been associated with this reaction based on different elements listed below.
** 0 associated gene:
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* Gene: [[Tiso_gene_10337]]
** 1 reconstruction source(s) associated:
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** Source: [[orthology-esiliculosus]]
*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_18040]]
* [[RXN-10780]]
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** Source: [[orthology-esiliculosus]]
** 2 associated gene(s):
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* Gene: [[Tiso_gene_18041]]
*** [[Tiso_gene_7322]]
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** Source: [[orthology-esiliculosus]]
*** [[Tiso_gene_3513]]
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== Pathways  ==
** 2 reconstruction source(s) associated:
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* [[PWY66-389]], phytol degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-389 PWY66-389]
*** [[orthology-athaliana]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
*** [[orthology-esiliculosus]]
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== Reconstruction information  ==
* [[RXN-10781]]
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* Category: [[orthology]]
** 5 associated gene(s):
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** Source: [[orthology-esiliculosus]]
*** [[Tiso_gene_6562]]
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*** Tool: [[pantograph]]
*** [[Tiso_gene_7649]]
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*** [[Tiso_gene_5424]]
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*** [[Tiso_gene_6563]]
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*** [[Tiso_gene_5425]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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* [[RXN-10782]]
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** 1 associated gene(s):
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*** [[Tiso_gene_5505]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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* [[RXN-10784]]
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** 2 associated gene(s):
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*** [[Tiso_gene_14140]]
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*** [[Tiso_gene_14141]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10778 RXN-10778]
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== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-33208}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=serotonin degradation}}
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{{#set: ec number=EC-1.3.1.38}}
{{#set: reaction found=6}}
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{{#set: gene associated=Tiso_gene_10337|Tiso_gene_18040|Tiso_gene_18041}}
{{#set: total reaction=7}}
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{{#set: in pathway=PWY66-389}}
{{#set: completion rate=86.0}}
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{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:10, 21 March 2018

Reaction RXN66-482

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 phytenoyl-CoA[c] + 1 H+[c] + 1 NADPH[c] => 1 NADP+[c] + 1 phytanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-389, phytol degradation: PWY66-389
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links