Difference between revisions of "Tiso gene 2717"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=P-PANTOCYSLIG-RXN P-PANTOCYSLIG-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzym...")
(Created page with "Category:Gene == Gene Tiso_gene_2717 == * right end position: ** 3957 * transcription direction: ** POSITIVE * left end position: ** 468 * centisome position: ** 2.526316...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=P-PANTOCYSLIG-RXN P-PANTOCYSLIG-RXN] ==
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== Gene Tiso_gene_2717 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3957
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/6.3.2.5 EC-6.3.2.5]
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** POSITIVE
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* left end position:
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** 468
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* centisome position:
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** 2.526316   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DIMETHYLGLYCINE-DEHYDROGENASE-RXN]]
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** 1 [[4-P-PANTOTHENATE]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[CTP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[R-4-PHOSPHOPANTOTHENOYL-L-CYSTEINE]][c] '''+''' 1 [[CMP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 (R)-4'-phosphopantothenate[c] '''+''' 1 L-cysteine[c] '''+''' 1 CTP[c] '''=>''' 1 diphosphate[c] '''+''' 1 H+[c] '''+''' 1 R-4'-phosphopantothenoyl-L-cysteine[c] '''+''' 1 CMP[c]
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* Reaction: [[GCVT-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN66-576]]
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* Gene: [[Tiso_gene_15171]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-synechocystis]]
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*** Assignment: automated-name-match
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== Pathways  ==
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== Pathways associated ==
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* [[COA-PWY]], coenzyme A biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY COA-PWY]
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* [[PWY-3661]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[GLYCLEAV-PWY]]
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== Reconstruction information  ==
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* [[PWY-3661-1]]
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3957}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25157 25157]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=468}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04231 R04231]
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{{#set: centisome position=2.526316    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=DIMETHYLGLYCINE-DEHYDROGENASE-RXN|GCVT-RXN|RXN66-576}}
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{{#set: ec number=EC-6.3.2.5}}
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{{#set: pathway associated=PWY-3661|GLYCLEAV-PWY|PWY-3661-1}}
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{{#set: gene associated=Tiso_gene_15171}}
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{{#set: in pathway=COA-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:11, 21 March 2018

Gene Tiso_gene_2717

  • right end position:
    • 3957
  • transcription direction:
    • POSITIVE
  • left end position:
    • 468
  • centisome position:
    • 2.526316
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2717&oldid=40067"