Difference between revisions of "RIBOSYN2-PWY"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6708 PWY-6708] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-330...")
 
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6708 PWY-6708] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY] ==
 
* taxonomic range:
 
* taxonomic range:
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** ubiquinol-8 biosynthesis (prokaryotic)
+
** flavin biosynthesis I (bacteria and plants)
 
* Synonym(s):
 
* Synonym(s):
−
** ubiquinone-8 biosynthesis (prokaryotic)
+
** riboflavin, FMN and FAD biosynthesis
 +
** vitamin B2 biosynthesis
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''4''' reactions found over '''8''' reactions in the full pathway
+
  '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[2-OCTAPRENYL-6-OHPHENOL-METHY-RXN]]
+
* [[DIOHBUTANONEPSYN-RXN]]
−
** 1 associated gene(s):
+
** 2 associated gene(s):
−
*** [[Tiso_gene_6943]]
+
*** [[Tiso_gene_14275]]
−
** 1 reconstruction source(s) associated:
+
*** [[Tiso_gene_19932]]
 +
** 2 reconstruction source(s) associated:
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
* [[2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN]]
 
−
** 1 associated gene(s):
 
−
*** [[Tiso_gene_19352]]
 
−
** 1 reconstruction source(s) associated:
 
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
* [[4OHBENZOATE-OCTAPRENYLTRANSFER-RXN]]
+
* [[FADSYN-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_5393]]
 +
*** [[Tiso_gene_5392]]
 +
*** [[Tiso_gene_7479]]
 +
*** [[Tiso_gene_1086]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
* [[GTP-CYCLOHYDRO-II-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_14275]]
 +
*** [[Tiso_gene_19932]]
 +
*** [[Tiso_gene_8035]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RIBOFLAVIN-SYN-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Tiso_gene_4719]]
+
*** [[Tiso_gene_13686]]
−
** 1 reconstruction source(s) associated:
+
** 4 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RIBOFLAVINKIN-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_7479]]
 +
*** [[Tiso_gene_16837]]
 +
*** [[Tiso_gene_1086]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
* [[DHHB-METHYLTRANSFER-RXN]]
+
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RIBOFLAVINSYNDEAM-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Tiso_gene_6943]]
+
*** [[Tiso_gene_1389]]
−
** 1 reconstruction source(s) associated:
+
** 4 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RIBOFLAVINSYNREDUC-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_8035]]
 +
*** [[Tiso_gene_1389]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=2-OCTAPRENYL-6-METHOXYPHENOL-HYDROX-RXN 2-OCTAPRENYL-6-METHOXYPHENOL-HYDROX-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=LUMAZINESYN-RXN LUMAZINESYN-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=2-OCTAPRENYLPHENOL-HYDROX-RXN 2-OCTAPRENYLPHENOL-HYDROX-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RIBOPHOSPHAT-RXN RIBOPHOSPHAT-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=3-OCTAPRENYL-4-OHBENZOATE-DECARBOX-RXN 3-OCTAPRENYL-4-OHBENZOATE-DECARBOX-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN]
+
 
== External links  ==
 
== External links  ==
 
* ECOCYC:
 
* ECOCYC:
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6708 PWY-6708]
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
 +
* ARACYC:
 +
** [http://metacyc.org/ARA/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
 +
{{#set: taxonomic range=TAX-33090}}
 
{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-2}}
−
{{#set: common name=ubiquinol-8 biosynthesis (prokaryotic)}}
+
{{#set: common name=flavin biosynthesis I (bacteria and plants)}}
−
{{#set: common name=ubiquinone-8 biosynthesis (prokaryotic)}}
+
{{#set: common name=riboflavin, FMN and FAD biosynthesis|vitamin B2 biosynthesis}}
−
{{#set: reaction found=4}}
+
{{#set: reaction found=7}}
−
{{#set: total reaction=8}}
+
{{#set: total reaction=9}}
−
{{#set: completion rate=50.0}}
+
{{#set: completion rate=78.0}}

Latest revision as of 19:12, 21 March 2018

Pathway RIBOSYN2-PWY

  • taxonomic range:
  • common name:
    • flavin biosynthesis I (bacteria and plants)
  • Synonym(s):
    • riboflavin, FMN and FAD biosynthesis
    • vitamin B2 biosynthesis

Reaction(s) found

7 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RIBOSYN2-PWY&oldid=40133"