Difference between revisions of "Tiso gene 17057"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Gene == Gene Tiso_gene_17057 == * right end position: ** 3704 * transcription direction: ** POSITIVE * left end position: ** 2469 * centisome position: ** 62.5379...")
 
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922] ==
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== Gene Tiso_gene_17057 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** 3704
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** POSITIVE
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* common name:
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* left end position:
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** L-Nδ-acetylornithine biosynthesis
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** 2469
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* centisome position:
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** 62.53799   
 
* Synonym(s):
 
* Synonym(s):
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** L-N-delta-acetylornithine biosynthesis
 
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** Nδ-acetyl-L-ornithine biosynthesis
 
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** L-N5-acetylornithine biosynthesis
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''6''' reactions found over '''7''' reactions in the full pathway
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* Reaction: [[ASPARTATEKIN-RXN]]
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* [[ARGINASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 associated gene(s):
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*** Assignment: automated-name-match
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*** [[Tiso_gene_4415]]
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** Source: [[orthology-esiliculosus]]
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** 4 reconstruction source(s) associated:
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* Reaction: [[GLUTKIN-RXN]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** Assignment: ec-number
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*** [[annotation-experimental_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** [[orthology-esiliculosus]]
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* Reaction: [[RXN-12002]]
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* [[GLUTKIN-RXN]]
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** Source: [[orthology-esiliculosus]]
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** 3 associated gene(s):
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== Pathways associated ==
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*** [[Tiso_gene_12021]]
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* [[HOMOSERSYN-PWY]]
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*** [[Tiso_gene_16634]]
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* [[PWY-7176]]
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*** [[Tiso_gene_17057]]
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* [[PROSYN-PWY]]
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** 7 reconstruction source(s) associated:
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* [[PWY-7153]]
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*** [[annotation-experimental_annotation]]
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* [[DAPLYSINESYN-PWY]]
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*** [[orthology-esiliculosus]]
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* [[PWY-2942]]
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*** [[annotation-in-silico_annotation]]
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* [[PWY-6922]]
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*** [[orthology-athaliana]]
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* [[PWY-2941]]
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*** [[orthology-synechocystis]]
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* [[PWY-6559]]
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*** [[manual-primary_network]]
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* [[PWY-3341]]
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*** [[orthology-creinhardtii]]
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* [[PWY-5097]]
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* [[GLUTSEMIALDEHYDROG-RXN]]
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* [[CITRULBIO-PWY]]
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** 2 associated gene(s):
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* [[PWY-6562]]
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*** [[Tiso_gene_16634]]
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* [[ARGININE-SYN4-PWY]]
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*** [[Tiso_gene_16258]]
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* [[P101-PWY]]
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** 6 reconstruction source(s) associated:
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−
*** [[orthology-esiliculosus]]
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−
*** [[annotation-in-silico_annotation]]
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−
*** [[orthology-athaliana]]
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−
*** [[orthology-synechocystis]]
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−
*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
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** 1 associated gene(s):
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−
*** [[Tiso_gene_11231]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-synechocystis]]
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* [[RXN-14903]]
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** 3 associated gene(s):
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*** [[Tiso_gene_18826]]
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*** [[Tiso_gene_18825]]
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*** [[Tiso_gene_9762]]
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** 2 reconstruction source(s) associated:
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−
*** [[annotation-in-silico_annotation]]
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−
*** [[orthology-esiliculosus]]
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* [[SPONTPRO-RXN]]
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−
** 0 associated gene:
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** 2 reconstruction source(s) associated:
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−
*** [[annotation-in-silico_annotation]]
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−
*** [[annotation-experimental_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12667 RXN-12667]
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== External links  ==
 
== External links  ==
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* PLANTCYC : PWY-6922
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{{#set: right end position=3704}}
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* ARACYC:
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{{#set: transcription direction=POSITIVE}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-6922 PWY-6922]
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{{#set: left end position=2469}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: centisome position=62.53799    }}
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{{#set: taxonomic range=TAX-33208}}
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{{#set: reaction associated=ASPARTATEKIN-RXN|GLUTKIN-RXN|RXN-12002}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: pathway associated=HOMOSERSYN-PWY|PWY-7176|PROSYN-PWY|PWY-7153|DAPLYSINESYN-PWY|PWY-2942|PWY-6922|PWY-2941|PWY-6559|PWY-3341|PWY-5097|CITRULBIO-PWY|PWY-6562|ARGININE-SYN4-PWY|P101-PWY}}
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{{#set: common name=L-Nδ-acetylornithine biosynthesis}}
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{{#set: common name=L-N-delta-acetylornithine biosynthesis|Nδ-acetyl-L-ornithine biosynthesis|L-N5-acetylornithine biosynthesis}}
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{{#set: reaction found=6}}
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{{#set: total reaction=7}}
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{{#set: completion rate=86.0}}
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Latest revision as of 19:13, 21 March 2018

Gene Tiso_gene_17057

  • right end position:
    • 3704
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2469
  • centisome position:
    • 62.53799
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17057&oldid=40232"