Difference between revisions of "PWY-102"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9542 RXN-9542] == * direction: ** LEFT-TO-RIGHT * common name: ** trans hexadecenoyl-[acp] redu...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-102 PWY-102] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3195 TAX-3195...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9542 RXN-9542] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-102 PWY-102] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3195 TAX-3195]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58023 TAX-58023]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* common name:
 
* common name:
−
** trans hexadecenoyl-[acp] reductase (NADPH, B-specific)
+
** gibberellin inactivation I (2β-hydroxylation)
−
** polyketide_synthase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.3.1.10 EC-1.3.1.10]
+
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
−
** [http://enzyme.expasy.org/EC/1.3.1.39 EC-1.3.1.39]
+
−
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** gibberellin 2β-hydroxylation
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''4''' reactions found over '''11''' reactions in the full pathway
−
** 1 [[2-Hexadecenoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Palmitoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
+
* [[RXN-113]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 a trans hexadecenoyl-[acp][c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 a palmitoyl-[acp][c] '''+''' 1 NADP+[c]
+
*** [[Tiso_gene_3330]]
−
 
+
** 2 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[orthology-athaliana]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-esiliculosus]]
−
* [[Tiso_gene_136]]
+
* [[RXN-115]]
−
** IN-SILICO_ANNOTATION
+
** 1 associated gene(s):
−
***EC-NUMBER
+
*** [[Tiso_gene_3330]]
−
* [[Tiso_gene_500]]
+
** 2 reconstruction source(s) associated:
−
** IN-SILICO_ANNOTATION
+
*** [[orthology-athaliana]]
−
***EC-NUMBER
+
*** [[orthology-esiliculosus]]
−
* [[Tiso_gene_13394]]
+
* [[RXN-171]]
−
** IN-SILICO_ANNOTATION
+
** 1 associated gene(s):
−
***EC-NUMBER
+
*** [[Tiso_gene_3330]]
−
* [[Tiso_gene_10778]]
+
** 2 reconstruction source(s) associated:
−
** [[pantograph]]-[[synechocystis]]
+
*** [[orthology-athaliana]]
−
* [[Tiso_gene_135]]
+
*** [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* [[RXN-6550]]
−
***EC-NUMBER
+
** 1 associated gene(s):
−
* [[Tiso_gene_10876]]
+
*** [[Tiso_gene_3330]]
−
** IN-SILICO_ANNOTATION
+
** 2 reconstruction source(s) associated:
−
***EC-NUMBER
+
*** [[orthology-athaliana]]
−
== Pathways  ==
+
*** [[orthology-esiliculosus]]
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
+
== Reaction(s) not found ==
−
** '''31''' reactions found over '''31''' reactions in the full pathway
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-114 RXN-114]
−
== Reconstruction information  ==
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-118 RXN-118]
−
* [[orthology]]:
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-172 RXN-172]
−
** [[pantograph]]:
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-292 RXN-292]
−
*** [[synechocystis]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-886 RXN-886]
−
* [[annotation]]:
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-947 RXN-947]
−
** [[pathwaytools]]:
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-991 RXN-991]
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* ARACYC:
−
{{#set: common name=trans hexadecenoyl-[acp] reductase (NADPH, B-specific)}}
+
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-102 PWY-102]
−
{{#set: common name=polyketide_synthase}}
+
{{#set: taxonomic range=TAX-3195}}
−
{{#set: ec number=EC-1.3.1.10}}
+
{{#set: taxonomic range=TAX-58023}}
−
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: ec number=EC-1.3.1.39}}
+
{{#set: taxonomic range=TAX-4751}}
−
{{#set: ec number=EC-2.3.1.85}}
+
{{#set: common name=gibberellin inactivation I (2β-hydroxylation)}}
−
{{#set: gene associated=Tiso_gene_136|Tiso_gene_500|Tiso_gene_13394|Tiso_gene_10778|Tiso_gene_135|Tiso_gene_10876}}
+
{{#set: common name=gibberellin 2β-hydroxylation}}
−
{{#set: in pathway=PWY-5994}}
+
{{#set: reaction found=4}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: total reaction=11}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: completion rate=36.0}}
−
{{#set: reconstruction source=synechocystis}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:33, 21 March 2018

Pathway PWY-102

  • taxonomic range:
  • common name:
    • gibberellin inactivation I (2β-hydroxylation)
  • Synonym(s):
    • gibberellin 2β-hydroxylation

Reaction(s) found

4 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-102&oldid=42337"