Difference between revisions of "2.3.1.41-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.41-RXN 2.3.1.41-RXN] == * direction: ** REVERSIBLE * common name: ** 3-oxoacyl-synthase * ec...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.41-RXN 2.3.1.41-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** REVERSIBLE
 
* common name:
 
* common name:
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** (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase)
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** 3-oxoacyl-synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''5''' reaction(s) found
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* With identifiers:
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** [[RXN-17115]]
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** 1 [[ACYL-ACP]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[B-KETOACYL-ACP]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** [[RXN-17109]]
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* With common name(s):
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** [[RXN-16112]]
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** 1 an acyl-[acyl-carrier protein][c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''<=>''' 1 a 3-oxoacyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c]
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** [[RXN-17116]]
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** [[RXN-17113]]
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== Genes associated with this reaction  ==
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== Reaction(s) not found ==
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Genes have been associated with this reaction based on different elements listed below.
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* '''8''' reaction(s) not found
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* Gene: [[Tiso_gene_9885]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-16081 RXN-16081]
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** Source: [[annotation-experimental_annotation]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-16079 RXN-16079]
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*** Assignment: AUTOMATED-NAME-MATCH
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17114 RXN-17114]
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* Gene: [[Tiso_gene_15991]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17110 RXN-17110]
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** Source: [[orthology-esiliculosus]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17111 RXN-17111]
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* Gene: [[Tiso_gene_5939]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17112 RXN-17112]
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** Source: [[annotation-in-silico_annotation]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-16114 RXN-16114]
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*** Assignment: EC-NUMBER
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-16113 RXN-16113]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_19302]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_13083]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_14485]]
 +
** Source: [[orthology-esiliculosus]]
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== Pathways  ==
 +
== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2759}}
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* LIGAND-RXN:
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{{#set: common name=(4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02768 R02768]
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{{#set: reaction found=5}}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction not found=8}}
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{{#set: common name=3-oxoacyl-synthase}}
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{{#set: ec number=EC-2.3.1.41}}
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{{#set: gene associated=Tiso_gene_9885|Tiso_gene_15991|Tiso_gene_5939|Tiso_gene_19302|Tiso_gene_13083|Tiso_gene_14485}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:33, 21 March 2018

Reaction 2.3.1.41-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • 3-oxoacyl-synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an acyl-[acyl-carrier protein][c] + 1 a malonyl-[acp][c] + 1 H+[c] <=> 1 a 3-oxoacyl-[acp][c] + 1 a holo-[acyl-carrier protein][c] + 1 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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