Difference between revisions of "RXN-646"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3101 PWY-3101] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-5...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-646 RXN-646] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3.5....")
 
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3101 PWY-3101] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-646 RXN-646] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
+
** LEFT-TO-RIGHT
−
* common name:
+
* ec number:
−
** flavonol biosynthesis
+
** [http://enzyme.expasy.org/EC/3.5.1.107 EC-3.5.1.107]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''4''' reactions found over '''7''' reactions in the full pathway
+
* With identifiers:
−
* [[RXN-12510]]
+
** 1 [[MALEAMATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MALEATE]][c] '''+''' 1 [[AMMONIUM]][c]
−
** 2 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_8263]]
+
** 1 maleamate[c] '''+''' 1 H2O[c] '''=>''' 1 maleate[c] '''+''' 1 ammonium[c]
−
*** [[Tiso_gene_1547]]
+
 
−
** 1 reconstruction source(s) associated:
+
== Genes associated with this reaction  ==
−
*** [[orthology-athaliana]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[RXN-527]]
+
* Gene: [[Tiso_gene_14341]]
−
** 1 associated gene(s):
+
** Source: [[orthology-athaliana]]
−
*** [[Tiso_gene_3330]]
+
** Source: [[orthology-esiliculosus]]
−
** 2 reconstruction source(s) associated:
+
== Pathways  ==
−
*** [[orthology-athaliana]]
+
* [[PWY-6993]], nicotine degradation II (pyrrolidine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6993 PWY-6993]
−
*** [[orthology-esiliculosus]]
+
** '''2''' reactions found over '''11''' reactions in the full pathway
−
* [[RXN-8450]]
+
* [[PWY-722]], nicotinate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-722 PWY-722]
−
** 1 associated gene(s):
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
*** [[Tiso_gene_3330]]
+
* [[PWY-5033]], nicotinate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5033 PWY-5033]
−
** 2 reconstruction source(s) associated:
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
*** [[orthology-athaliana]]
+
* [[PWY-7128]], nicotine degradation III (VPP pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7128 PWY-7128]
−
*** [[orthology-esiliculosus]]
+
** '''1''' reactions found over '''10''' reactions in the full pathway
−
* [[RXN1F-93]]
+
== Reconstruction information  ==
−
** 1 associated gene(s):
+
* Category: [[orthology]]
−
*** [[Tiso_gene_3330]]
+
** Source: [[orthology-athaliana]]
−
** 2 reconstruction source(s) associated:
+
*** Tool: [[pantograph]]
−
*** [[orthology-athaliana]]
+
** Source: [[orthology-esiliculosus]]
−
*** [[orthology-esiliculosus]]
+
*** Tool: [[pantograph]]
−
== Reaction(s) not found ==
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13718 RXN-13718]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-525 RXN-525]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7782 RXN-7782]
+
 
== External links  ==
 
== External links  ==
−
* ARACYC:
+
* RHEA:
−
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-3101 PWY-3101]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27385 27385]
−
{{#set: taxonomic range=TAX-58024}}
+
* LIGAND-RXN:
−
{{#set: common name=flavonol biosynthesis}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03540 R03540]
−
{{#set: reaction found=4}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: total reaction=7}}
+
{{#set: ec number=EC-3.5.1.107}}
−
{{#set: completion rate=57.0}}
+
{{#set: gene associated=Tiso_gene_14341}}
 +
{{#set: in pathway=PWY-6993|PWY-722|PWY-5033|PWY-7128}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:17, 21 March 2018

Reaction RXN-646

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 maleamate[c] + 1 H2O[c] => 1 maleate[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6993, nicotine degradation II (pyrrolidine pathway): PWY-6993
    • 2 reactions found over 11 reactions in the full pathway
  • PWY-722, nicotinate degradation I: PWY-722
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5033, nicotinate degradation II: PWY-5033
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7128, nicotine degradation III (VPP pathway): PWY-7128
    • 1 reactions found over 10 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-646&oldid=40630"