Difference between revisions of "RIBITOLUTIL-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.2.23-RXN 3.2.2.23-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** formamidopyrimidine-d...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=RIBITOLUTIL-PWY RIBITOLUTIL-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=T...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.2.23-RXN 3.2.2.23-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=RIBITOLUTIL-PWY RIBITOLUTIL-PWY] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
 
* common name:
 
* common name:
** formamidopyrimidine-dna_glycosylase
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** ribitol degradation
** endonuclease_iii_8-oxoguanine_dna_glycosylase_isoform_1b
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** n-glycosylase_dna_lyase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.2.23 EC-3.2.2.23]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''2''' reactions in the full pathway
** 1 [[DNA-containing-diamino-hydro-formamidops]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DNA-containing-aPurinic-Sites]][c] '''+''' 1 [[CPD-16491]][c]
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* [[D-RIBULOKIN-RXN]]
* With common name(s):
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** 0 associated gene:
** 1 a ring-opened 7-methylguanine in DNA[c] '''+''' 1 H2O[c] '''=>''' 1 an apurinic site within DNA[c] '''+''' 1 2,6-diamino-4-hydroxy-5-(N-methyl)formamidopyrimidine[c]
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** 1 reconstruction source(s) associated:
 
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*** [[annotation-in-silico_annotation]]
== Genes associated with this reaction  ==
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* [[RIBITOL-2-DEHYDROGENASE-RXN]]
Genes have been associated with this reaction based on different elements listed below.
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** 4 associated gene(s):
* Gene: [[Tiso_gene_16992]]
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*** [[Tiso_gene_15780]]
** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_10870]]
*** Assignment: EC-NUMBER
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*** [[Tiso_gene_5087]]
* Gene: [[Tiso_gene_1280]]
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*** [[Tiso_gene_14162]]
** Source: [[annotation-in-silico_annotation]]
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** 1 reconstruction source(s) associated:
*** Assignment: AUTOMATED-NAME-MATCH
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*** [[orthology-esiliculosus]]
* Gene: [[Tiso_gene_9068]]
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== Reaction(s) not found ==
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_6558]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_14609]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* UNIPROT:
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{{#set: taxonomic range=TAX-1224}}
** [http://www.uniprot.org/uniprot/P44948 P44948]
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{{#set: common name=ribitol degradation}}
** [http://www.uniprot.org/uniprot/P57014 P57014]
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{{#set: reaction found=2}}
** [http://www.uniprot.org/uniprot/P05523 P05523]
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{{#set: total reaction=2}}
** [http://www.uniprot.org/uniprot/P19210 P19210]
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{{#set: completion rate=100.0}}
** [http://www.uniprot.org/uniprot/P74290 P74290]
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** [http://www.uniprot.org/uniprot/O69470 O69470]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=formamidopyrimidine-dna_glycosylase}}
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{{#set: common name=endonuclease_iii_8-oxoguanine_dna_glycosylase_isoform_1b}}
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{{#set: common name=n-glycosylase_dna_lyase}}
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{{#set: ec number=EC-3.2.2.23}}
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{{#set: gene associated=Tiso_gene_16992|Tiso_gene_1280|Tiso_gene_9068|Tiso_gene_6558|Tiso_gene_14609}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:17, 21 March 2018

Pathway RIBITOLUTIL-PWY

  • taxonomic range:
  • common name:
    • ribitol degradation
  • Synonym(s):

Reaction(s) found

2 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links