Difference between revisions of "RXN-12968"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12968 RXN-12968] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
 
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12968 RXN-12968] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** D-galactose degradation III
+
** chloroplast_beta-keto_acyl_reductase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
 
* Synonym(s):
 
* Synonym(s):
−
** UDP-D-galatose biosynthesis (from D-galactose)
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''3''' reactions found over '''3''' reactions in the full pathway
+
* With identifiers:
−
* [[GALACTOKIN-RXN]]
+
** 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[CPD-14404]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[CPD-14405]][c]
−
** 5 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_11795]]
+
** 1 NAD(P)H[c] '''+''' 1 3-oxo-dihomo γ-linolenoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 NAD(P)+[c] '''+''' 1 3R-hydroxy-dihomo γ-linolenoyl-CoA[c]
−
*** [[Tiso_gene_12191]]
+
 
−
*** [[Tiso_gene_5041]]
+
== Genes associated with this reaction  ==
−
*** [[Tiso_gene_10797]]
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[Tiso_gene_5042]]
+
* Gene: [[Tiso_gene_9871]]
−
** 5 reconstruction source(s) associated:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
−
*** [[orthology-athaliana]]
+
** Source: [[annotation-experimental_annotation]]
−
*** [[orthology-creinhardtii]]
+
*** Assignment: EC-NUMBER
−
*** [[orthology-esiliculosus]]
+
== Pathways  ==
−
*** [[annotation-experimental_annotation]]
+
* [[PWY-5353]], arachidonate biosynthesis I (6-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5353 PWY-5353]
−
* [[UDPGLUCEPIM-RXN]]
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
** 4 associated gene(s):
+
* [[PWY-7592]], arachidonate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7592 PWY-7592]
−
*** [[Tiso_gene_9823]]
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
*** [[Tiso_gene_15395]]
+
== Reconstruction information  ==
−
*** [[Tiso_gene_3236]]
+
* Category: [[annotation]]
−
*** [[Tiso_gene_10797]]
+
** Source: [[annotation-experimental_annotation]]
−
** 5 reconstruction source(s) associated:
+
*** Tool: [[pathwaytools]]
−
*** [[annotation-in-silico_annotation]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[orthology-athaliana]]
+
*** Tool: [[pathwaytools]]
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-synechocystis]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[UTPHEXPURIDYLYLTRANS-RXN]]
+
−
** 6 associated gene(s):
+
−
*** [[Tiso_gene_9110]]
+
−
*** [[Tiso_gene_6457]]
+
−
*** [[Tiso_gene_6459]]
+
−
*** [[Tiso_gene_14796]]
+
−
*** [[Tiso_gene_17566]]
+
−
*** [[Tiso_gene_6458]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[annotation-experimental_annotation]]
+
−
== Reaction(s) not found ==
+
 
== External links  ==
 
== External links  ==
−
* ARACYC:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-3821 PWY-3821]
+
{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
−
{{#set: taxonomic range=TAX-3193}}
+
{{#set: ec number=EC-1.1.1.330}}
−
{{#set: common name=D-galactose degradation III}}
+
{{#set: gene associated=Tiso_gene_9871}}
−
{{#set: common name=UDP-D-galatose biosynthesis (from D-galactose)}}
+
{{#set: in pathway=PWY-5353|PWY-7592}}
−
{{#set: reaction found=3}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: total reaction=3}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
−
{{#set: completion rate=100.0}}
+
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:17, 21 March 2018

Reaction RXN-12968

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • chloroplast_beta-keto_acyl_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD(P)H[c] + 1 3-oxo-dihomo γ-linolenoyl-CoA[c] + 1 H+[c] => 1 NAD(P)+[c] + 1 3R-hydroxy-dihomo γ-linolenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5353, arachidonate biosynthesis I (6-desaturase, lower eukaryotes): PWY-5353
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-7592, arachidonate biosynthesis III (6-desaturase, mammals): PWY-7592
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12968&oldid=40683"