Difference between revisions of "Tiso gene 8713"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Gene == Gene Tiso_gene_8713 == * right end position: ** 4939 * transcription direction: ** NEGATIVE * left end position: ** 2854 * centisome position: ** 28.65174...")
 
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863] ==
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== Gene Tiso_gene_8713 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** 4939
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* transcription direction:
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* common name:
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** NEGATIVE
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** pyruvate fermentation to hexanol (engineered)
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* left end position:
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** 2854
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* centisome position:
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** 28.651741   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''5''' reactions found over '''11''' reactions in the full pathway
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* Reaction: [[6.3.4.10-RXN]]
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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** Source: [[orthology-esiliculosus]]
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** 3 associated gene(s):
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* Reaction: [[6.3.4.11-RXN]]
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*** [[Tiso_gene_16181]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_15327]]
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* Reaction: [[6.3.4.9-RXN]]
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*** [[Tiso_gene_17451]]
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** Source: [[orthology-esiliculosus]]
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** 4 reconstruction source(s) associated:
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* Reaction: [[BIOTINLIG-RXN]]
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*** [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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*** [[orthology-creinhardtii]]
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* Reaction: [[RXN-13039]]
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*** [[orthology-synechocystis]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: automated-name-match
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* [[RXN-11662]]
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* Reaction: [[RXN-17127]]
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** 7 associated gene(s):
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_16703]]
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*** Assignment: automated-name-match
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*** [[Tiso_gene_14027]]
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* Reaction: [[RXN-8654]]
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*** [[Tiso_gene_14262]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_14026]]
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*** Assignment: automated-name-match
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*** [[Tiso_gene_18838]]
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* Reaction: [[RXN-8655]]
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*** [[Tiso_gene_18839]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_5857]]
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*** Assignment: automated-name-match
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** 5 reconstruction source(s) associated:
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* Reaction: [[RXN0-1141]]
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*** [[annotation-experimental_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** Assignment: automated-name-match
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*** [[annotation-in-silico_annotation]]
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* Reaction: [[RXN0-5098]]
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*** [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: automated-name-match
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* [[RXN-11667]]
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== Pathways associated ==
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** 1 associated gene(s):
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* [[PWY-6984]]
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*** [[Tiso_gene_5857]]
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* [[PWY0-1264]]
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** 1 reconstruction source(s) associated:
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* [[PWY0-522]]
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*** [[orthology-athaliana]]
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* [[PWY0-1275]]
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* [[RXN-12565]]
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** 6 associated gene(s):
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*** [[Tiso_gene_3856]]
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*** [[Tiso_gene_3855]]
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*** [[Tiso_gene_17451]]
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*** [[Tiso_gene_15327]]
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*** [[Tiso_gene_10116]]
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*** [[Tiso_gene_16181]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-experimental_annotation]]
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* [[RXN-12570]]
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** 6 associated gene(s):
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−
*** [[Tiso_gene_14026]]
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−
*** [[Tiso_gene_14027]]
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−
*** [[Tiso_gene_5857]]
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−
*** [[Tiso_gene_14262]]
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−
*** [[Tiso_gene_18838]]
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−
*** [[Tiso_gene_18839]]
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** 5 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-athaliana]]
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−
*** [[annotation-in-silico_annotation]]
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−
*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=HEXANOL-RXN HEXANOL-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12558 RXN-12558]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12559 RXN-12559]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12567 RXN-12567]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12568 RXN-12568]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2759}}
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{{#set: right end position=4939}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=pyruvate fermentation to hexanol (engineered)}}
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{{#set: left end position=2854}}
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{{#set: reaction found=5}}
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{{#set: centisome position=28.651741    }}
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{{#set: total reaction=11}}
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{{#set: reaction associated=6.3.4.10-RXN|6.3.4.11-RXN|6.3.4.9-RXN|BIOTINLIG-RXN|RXN-13039|RXN-17127|RXN-8654|RXN-8655|RXN0-1141|RXN0-5098}}
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{{#set: completion rate=45.0}}
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{{#set: pathway associated=PWY-6984|PWY0-1264|PWY0-522|PWY0-1275}}

Latest revision as of 19:17, 21 March 2018

Gene Tiso_gene_8713

  • right end position:
    • 4939
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 2854
  • centisome position:
    • 28.651741
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8713&oldid=40688"