Difference between revisions of "PWY-6287"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9624 RXN-9624] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6287 PWY-6287] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9624 RXN-9624] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6287 PWY-6287] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
* ec number:
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* common name:
** [http://enzyme.expasy.org/EC/3.1.2.2 EC-3.1.2.2]
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** neurosporene biosynthesis
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''4''' reactions found over '''5''' reactions in the full pathway
** 1 [[STEAROYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[STEARIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c]
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* [[2.5.1.32-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 stearoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 stearate[c] '''+''' 1 H+[c] '''+''' 1 coenzyme A[c]
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*** [[Tiso_gene_15914]]
 
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** 2 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[orthology-synechocystis]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
* Gene: [[Tiso_gene_7477]]
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* [[RXN-8022]]
** Source: [[orthology-athaliana]]
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** 1 associated gene(s):
* Gene: [[Tiso_gene_801]]
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*** [[Tiso_gene_7142]]
** Source: [[orthology-creinhardtii]]
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** 1 reconstruction source(s) associated:
== Pathways  ==
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*** [[orthology-esiliculosus]]
* [[PWY-5972]], stearate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5972 PWY-5972]
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* [[RXN-8024]]
** '''4''' reactions found over '''6''' reactions in the full pathway
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** 2 associated gene(s):
* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
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*** [[Tiso_gene_3579]]
** '''8''' reactions found over '''18''' reactions in the full pathway
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*** [[Tiso_gene_2193]]
* [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355]
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** 1 reconstruction source(s) associated:
** '''6''' reactions found over '''6''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
== Reconstruction information  ==
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* [[RXNARA-8002]]
* Category: [[orthology]]
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** 1 associated gene(s):
** Source: [[orthology-athaliana]]
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*** [[Tiso_gene_15914]]
*** Tool: [[pantograph]]
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** 1 reconstruction source(s) associated:
** Source: [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
*** Tool: [[pantograph]]
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== Reaction(s) not found ==
* Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8023 RXN-8023]
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-2}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30139 30139]
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{{#set: common name=neurosporene biosynthesis}}
* LIGAND-RXN:
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{{#set: reaction found=4}}
** [http://www.genome.jp/dbget-bin/www_bget?R08174 R08174]
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{{#set: total reaction=5}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=80.0}}
{{#set: ec number=EC-3.1.2.2}}
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{{#set: gene associated=Tiso_gene_7477|Tiso_gene_801}}
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{{#set: in pathway=PWY-5972|PWY-6733|PWY3O-355}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:18, 21 March 2018

Pathway PWY-6287

  • taxonomic range:
  • common name:
    • neurosporene biosynthesis
  • Synonym(s):

Reaction(s) found

4 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links